Methanosarcina barkeri MS: MSBRM_1706
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Entry
MSBRM_1706 CDS
T03838
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mby
Methanosarcina barkeri MS
Pathway
mby04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSBRM_1706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mby03019
]
MSBRM_1706
03009 Ribosome biogenesis [BR:
mby03009
]
MSBRM_1706
04131 Membrane trafficking [BR:
mby04131
]
MSBRM_1706
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mby04147
]
MSBRM_1706
Messenger RNA biogenesis [BR:
mby03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSBRM_1706
Ribosome biogenesis [BR:
mby03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSBRM_1706
Membrane trafficking [BR:
mby04131
]
SNARE
SNARE associated proteins
Others
MSBRM_1706
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSBRM_1706
Exosome [BR:
mby04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSBRM_1706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
AAA_5
CDC48_2
AAA_22
AAA_14
TIP49
AAA_33
ABC_tran
AAA_24
AAA_28
Parvo_NS1
Mg_chelatase
IstB_IS21
nSTAND3
RNA_helicase
NACHT
NPHP3_N
Sigma54_activat
AAA_7
AAA_18
AAA_lid_PRS2_C
AAA_25
AAA_17
Vps4_C
ATPase_2
PhoH
ATPase
NB-ARC
TsaE
Zeta_toxin
DUF815
SLFN-g3_helicase
ResIII
AAA_3
ORC-CDC6-like
Sigma54_activ_2
bpMoxR
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AKB54704
UniProt:
A0A0E3QVL3
LinkDB
All DBs
Position
complement(2232170..2234464)
Genome browser
AA seq
764 aa
AA seq
DB search
MADREKITAKLKVAEADQRDVGKGIVRVDDSFREKLGLKPFDVVEIRGGKSTSALVGRPY
PSDSGLDIIRMDGLIRTNAKTSIGEYVDIRKADWKEARSVTLAPVAKGLQIYAPSETLKA
VFMNRTVSKGDFISTTSLRRSRERETFGKGVMFEDFFQDFFGPGMGQSFGLGEIKLQVVS
TSPSGIVKITDMTEIELLPEAAEITPEQNVPTVMYEDLGGVKEAITKIREMIELPLKHPE
LFDRLGIDAPKGVLLYGPPGTGKTMLAKAVANETDAYFISVNGPEIMSKYYGESEKGIRD
VFEEAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTN
RPEAIDMALRRPGRFDREIELRVPDTEGRLEIFQIHTRGMPLAENVNLMDFAQITYGFVG
ADIAALCREAAMSSLRRILPKINLNEPEIPSEILDTLRVTREDFENALKDVQPSAIREIL
IEIPNVSWEDVGGLEGVKQLLKEAVEWPLKSPESYRDIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESEANFITAKGSDLLSKWYGESEKRIAEVFSRARQVAPSIIFLDELDSLAPIRGA
AIGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDIIDPALLRPGRFDELILVPVPD
AGARKEIFRVHTAKMSLAEDVDIDKLVSMTDQYTGADIAAVCKKAGRDALREDLHAKEVK
QKHFLQSIAETGPSVTPDTMKYYQAVHSGLRKRQSKEIETPFYI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacagggaaaagataactgcaaaactaaaagttgcagaagctgatcaaagagat
gtcggaaaaggaatagttagggtcgacgatagtttcagggaaaagctgggcctcaagccc
tttgacgttgtggaaataagagggggaaaatcgacttcagctctggtaggacgtccatat
cccagcgattcgggcctggatattatccgtatggacgggcttatccgtaccaatgcaaaa
accagcataggggagtatgtggatattcgcaaggccgactggaaagaagcaaggagtgta
actctcgcgcctgtagctaagggcttgcagatctatgctccaagtgaaactcttaaagcc
gtattcatgaatcgtacggtttctaagggagattttatttccaccacaagtttgaggcgg
tcacgggaaagagagacttttggaaaaggagttatgttcgaggatttctttcaggacttt
tttggtccaggtatggggcagtcatttgggctgggagaaataaagttacaggttgtctcc
acttccccgtccgggatagtaaagattacagatatgacagagattgaactcttacctgaa
gctgcagaaataactcctgaacagaatgttcccactgtcatgtatgaggatctgggtggg
gttaaagaggctattaccaaaataagagaaatgatagagctacctttgaagcatcctgaa
ctttttgacaggctgggaatcgatgctccaaaaggagtactgctttatggaccgcctgga
acaggcaagacaatgcttgcaaaagcagttgcaaacgagacagatgcttactttatctca
gtcaatggtccggaaattatgtccaagtattatggagagtccgaaaaaggtatcagagac
gtcttcgaagaagcagagaaaaacgctcctgcaatcattttccttgatgaaatcgattcc
attgcacctaagagggctgaggtgactggagaggtcgaaagaagagtagttgctcaactc
ctttccctgatggatgggcttaaagctcgcaagaacgtgattgtgatagggtcaaccaac
cgtcctgaagcaattgatatggcacttcgtcgccctggtagatttgacagagagattgag
ttaagggttccggacaccgaaggaaggcttgagattttccagattcacacaagaggtatg
ccgcttgccgaaaacgtaaatcttatggacttcgctcagataacttatgggtttgtagga
gctgacattgctgcgctttgtcgggaagctgcaatgagttccttgagacggattctaccg
aagattaacctcaatgaacctgaaattccaagtgagatccttgacacacttcgggtcaca
agggaagattttgaaaatgcccttaaagatgtccagccgtctgctataagagaaatcctt
atcgagattcctaatgtgagctgggaagatgtaggtggtctggagggtgtaaaacaactt
ttgaaggaagctgtggagtggcctcttaaaagtccggaatcgtacagggatataggagtt
gaggctcccaaaggagtgcttctatatggtcctccgggtactggaaagactcttcttgca
aaagccattgcccatgagtctgaagctaacttcatcaccgcaaaaggaagcgatcttctc
tccaagtggtatggagagtctgaaaaaaggattgccgaggttttttcacgggcaaggcag
gttgctccatctattattttcctggacgaactcgactctcttgcgcccattcgcggggct
gccataggtgagccacaggttacagctagaatcctgaatcagcttctttccgagatggat
gggcttgaggaacttagagctgtagtggtaataggtgcaaccaaccgtcctgatatcata
gatcctgctcttctaaggcctggacgttttgacgagttaattcttgttcccgttccggat
gcgggagctcgcaaggaaatttttagggtccataccgcaaaaatgtcgcttgcagaggat
gttgatatcgacaaactcgtttctatgaccgatcagtatacaggtgctgatattgcagct
gtgtgcaaaaaggcaggaagagatgcacttcgcgaagaccttcatgccaaagaagtaaag
cagaaacatttccttcaatcgattgctgaaaccgggccttcggttactcctgataccatg
aaatattaccaagctgtacatagtggcctgagaaaaagacagtcaaaagaaatagagaca
ccattttatatctga
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