Methanosarcina barkeri MS: MSBRM_2036
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Entry
MSBRM_2036 CDS
T03838
Name
(GenBank) Shwachman-Bodian-Diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
mby
Methanosarcina barkeri MS
Pathway
mby03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MSBRM_2036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mby03009
]
MSBRM_2036
Ribosome biogenesis [BR:
mby03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
MSBRM_2036
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Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
Motif
Other DBs
NCBI-ProteinID:
AKB55034
UniProt:
A0A0E3QUV4
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All DBs
Position
complement(2666060..2666752)
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AA seq
230 aa
AA seq
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MVSLDEAVTARLKRGSKHFEVLVEPEGALAYKRGEDVNLEDILAVETIFEDANRGDRAAE
SDILNSFETTDPFKIAAVILKSGELQLTAEQRKRMLEEKKKKVIYTISRNAINPQTKAPH
PPARIEKAMEEAKVHIDPLKSVDQLVKITMKAIRPLIPIRFEEVNIAVKIPPEYAPKAYG
DISKIGSITKEEWQRDGSWIAVVRIPAGVQTDLYALINHLTKGEAQTKLL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccctggacgaggcagtgactgcgcggcttaagagaggcagcaaacacttcgaa
gtcctggtcgagcccgaaggagctctggcctataagcgaggagaagacgtaaaccttgaa
gatattctggcggttgaaactatcttcgaagacgcaaaccgaggggaccgagcagcagag
tccgatattctcaattcttttgagacaacggatcccttcaagattgctgccgtgatcctg
aaaagtggggagcttcagctcactgctgaacagagaaaacgcatgcttgaggaaaaaaag
aaaaaagttatttataccatttccaggaatgcaataaatccccagacaaaagcacctcat
cctcccgcaaggatcgaaaaggcgatggaagaggcaaaggtgcacatagaccccttaaaa
agtgtggatcagctggtcaaaatcacaatgaaagccattcgcccgcttatacctatacgc
tttgaagaggtcaatattgctgtgaaaatccctcccgaatatgctcccaaagcatacgga
gatatttccaagataggaagcattacgaaagaagaatggcagcgtgatggctcctggatt
gcggtggtaagaatcccggcaggagtacagactgatctttacgctcttataaatcatctt
acgaagggagaggctcaaactaaacttttataa
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