Methanosarcina barkeri MS: MSBRM_2239
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Entry
MSBRM_2239 CDS
T03838
Name
(GenBank) Coenzyme B synthesis from 2-oxoglutarate: steps 1, 6, and 10
KO
K10977
methanogen homocitrate synthase [EC:
2.3.3.14
2.3.3.-]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby00300
Lysine biosynthesis
mby00620
Pyruvate metabolism
mby00680
Methane metabolism
mby01100
Metabolic pathways
mby01110
Biosynthesis of secondary metabolites
mby01120
Microbial metabolism in diverse environments
mby01210
2-Oxocarboxylic acid metabolism
mby01230
Biosynthesis of amino acids
mby01240
Biosynthesis of cofactors
Module
mby_M00608
2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
MSBRM_2239
09102 Energy metabolism
00680 Methane metabolism
MSBRM_2239
09105 Amino acid metabolism
00300 Lysine biosynthesis
MSBRM_2239
Enzymes [BR:
mby01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.14 homocitrate synthase
MSBRM_2239
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
HCS_D2
Phage_TAC_12
DUF5693
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
AKB55237
UniProt:
A0A0E3QWW1
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Position
complement(2936465..2937682)
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AA seq
405 aa
AA seq
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MSESEQYSRNELMDFIEYRPLDIEICDVTLRDGEQTPGVVFTKEQKLAMASELDSMGVEV
IEAGFPVVSANEKETVKEIANQGFNSRICCLSRAVKGDVDAALECDVDIVSIFIAMSDMH
LKYKYHRSLEEMLGCAKETIEYATDHGLKVRFAAEDASRTPIDRLKKAFKEVENEYKVQY
LSLADTIGILNPTTTHYLVSEIFKEVNTSICIHCHDDLGMATANTLAAAEAGAKQLHTTV
NAIGERAGNASLEEVMVALRVQYGIDRYDTTKLTSLSRMVSEYSGITPPVNKAVVGQNAF
THESGIHVAAILEEPRTYELFLPEMVGGKRNLVVGKHTGTKALKGIINSIGFCLEREELC
ALIDKVKVCTEEKHKSISRDQLERLITQVRQESKTTEKGEEKFSI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagagcgagcagtattccagaaacgaacttatggattttatcgaatatcgcccc
ctagatatcgaaatctgtgacgtgaccctgcgcgatggggaacagactccaggcgttgtg
ttcacaaaggaacagaagctggcaatggccagtgaacttgattctatgggtgtcgaggtt
atagaagccggatttccggtagtttccgcaaatgaaaaggaaaccgttaaggaaattgca
aatcagggctttaattcaaggatctgctgcctctcaagagcagtaaaaggggacgtggac
gctgcacttgaatgtgatgtcgatattgtgagtatttttattgcaatgtcggacatgcac
ctcaaatacaagtatcatcgaagcctggaggagatgcttggctgtgccaaggaaaccatt
gaatatgcgaccgatcacgggttaaaagtacgttttgcagccgaagatgctagccggacc
ccgattgaccgcctgaaaaaggctttcaaggaagtcgaaaatgaatataaggtgcagtac
ttaagccttgcagatacgatcggtatccttaaccctacaacgacacactatcttgttagt
gaaattttcaaggaagttaatacctcaatctgtatccactgccatgacgacctaggaatg
gccaccgcaaatacccttgcagctgctgaggccggggcaaaacagctccataccacagtt
aatgcgatcggagaacgtgcaggaaatgcttcccttgaagaagtaatggtagccctaagg
gttcagtacggtattgaccgctatgacaccacgaagctaacttcgctttccagaatggtt
tcggaatattcaggtatcacgcccccggtaaataaagcggttgttgggcaaaacgccttt
actcatgaatccggaatccatgttgcagcaatcctggaagaaccgcgtacttatgaactc
ttcctcccggaaatggttggtgggaagcgcaatcttgtcgtaggaaagcataccggcaca
aaagccttaaaaggcattattaacagcataggcttctgccttgagcgggaggaactctgc
gccctgatcgataaagtcaaggtctgcaccgaagaaaaacataaaagcatctcacgggat
cagctcgaaaggctgattactcaggtcaggcaggaaagtaaaacaacagaaaagggagag
gagaagttttctatttga
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