Methanosarcina barkeri MS: MSBRM_2334
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Entry
MSBRM_2334 CDS
T03838
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
mby
Methanosarcina barkeri MS
Pathway
mby02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MSBRM_2334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mby02000
]
MSBRM_2334
Transporters [BR:
mby02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MSBRM_2334
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
ABC_ATPase
nSTAND1
DUF87
HisZ-like
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AKB55332
UniProt:
A0A0E3QWZ8
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Position
3064317..3065501
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AA seq
394 aa
AA seq
DB search
MQLWLDKVNTVMRENLLGVRVIKAFNLEDKQNALFSKVNTEFTEKSIQAQNLTFTLMPIA
TLVMNLSMVAILWFGGNMVVSGNIETGKIMAFVNYLVQITNSLIMLVNMIVNISRAQASA
GRIKEVLDCEASIKQCNSPVLPENYDIEFKNVSFRYGESGEYVLKDLSFLLKEGQTVGII
GATGSGKSSVVSLIPRLYEATCGQVLIGGCDVKDIPVQYLRSNIGIVLQENVLFQGTVKE
NMNFGNEEADEEEIWNSLQAAQAEDFIQALPYKLQSQIEQRGKNFSGGQKQRLSIARTLL
KNPKILIFDDSASAVDLSTEARLQFEIAKKMKENTVIVIAQRISGVMDADTILMLDHGSV
IAKGTHKELLQSNEVYRNIAVSQLGKEVLLNATE
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcagctctggcttgacaaggttaataccgtcatgcgtgaaaatctgctgggtgtacgt
gttataaaagcctttaatttagaagacaaacagaatgcgcttttcagcaaagtgaataca
gaatttacagaaaaaagcatacaggcacagaatctgacctttacgctgatgccgatagct
actctggttatgaatctaagcatggttgccatcctgtggttcggaggcaatatggtcgtt
tccggaaatattgaaacaggcaagataatggcatttgtcaattaccttgtgcagataaca
aactctcttataatgcttgtcaacatgattgtaaacatttcacgcgcacaggcatctgca
ggacgtataaaagaggttttggactgcgaagcgagtattaagcagtgcaattcccccgta
ttgccagagaattatgacattgagttcaaaaatgttagttttagatacggtgaaagcgga
gaatatgttctgaaagatttgtcattcctgttaaaggaagggcagacagtaggtattatc
ggagctaccggctcaggaaagagttcagttgtaagtctgattccgcggctgtatgaggca
acctgtggacaggtcctgatcggaggttgtgatgttaaggacataccagtacagtacctg
cgtagcaatattggaatcgtgctgcaggaaaacgtcctttttcaggggacagttaaagaa
aatatgaattttggcaatgaagaagcagacgaagaggaaatatggaatagtcttcaagct
gctcaggcagaagattttattcaggccctcccttacaaattacaaagtcaaattgaacaa
agaggcaaaaacttttcaggtggacagaaacagcgcctttccatagcaagaactcttctg
aaaaatccaaagattttgatttttgatgattccgctagcgcagttgacctttcgaccgaa
gctcgcctgcagtttgaaattgcaaaaaagatgaaggaaaacacagtaatcgtcattgcg
cagcgtatatccggcgttatggacgcagacacaatattgatgctcgaccatggcagcgtt
attgcgaaaggtacccataaagaattactgcaaagcaacgaagtatatcgcaatatagcc
gtttcacagcttggcaaggaggtgctcctgaatgccacagaatga
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