Methanosarcina barkeri MS: MSBRM_2370
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Entry
MSBRM_2370 CDS
T03838
Name
(GenBank) Thiamin biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby00730
Thiamine metabolism
mby01100
Metabolic pathways
mby01240
Biosynthesis of cofactors
Module
mby_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MSBRM_2370
Enzymes [BR:
mby01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
MSBRM_2370
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
AKB55368
UniProt:
A0A0E3QX64
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Position
complement(3128522..3129799)
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AA seq
425 aa
AA seq
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MEDAKKGIVTPSIEAVAKAEGIDAETVRSCVVKGLIAIPVNNRRETLPIGIGKYMSTKIN
ANVGTSRDYIDIDAEVEKAKAAETFGAHAVMDLSTGGNLDEIRTRILKSVNIPVGTVPIY
QAAASRKVVVEMTSDDMFNAVRKHAKQGVDFVTVHAGVNLNSLERLRQSDRIMNVVSRGG
SFTLAWMLHNGEDNPFYAEFDYLLEIAKEYDMTLSLGDGMRPGCIADASDRPKFMEFITL
GELVKRARAANVQTFVEGPGHVPLNEIELSVRGMKELCNGAPLYLLGPLVTDIAPGFDHI
TGAIGGAVAGMYGTDFLCMVTPSEHLALPALEDIKEGLLVTKVAAHTIDLIKEGPRERAW
EKDLAMAYARRDLDWEKQFELAIDGNRARKIRDARKTESDTCSMCGDLCALKIVKEAFEN
KKTEE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgcaaagaagggaatcgtcaccccctctatagaagccgtggcaaaagctgaa
ggaatagacgctgagactgtccgctcctgcgtggtaaaagggctaatcgctatccccgta
aataacaggcgagagacccttcctataggtattggcaagtacatgagcacaaagatcaat
gccaatgtaggaacatcgagagattatatagacattgatgccgaagttgaaaaagcaaag
gcagccgaaactttcggtgctcatgccgtaatggatctttctacaggcggaaatcttgat
gaaattcgcactcgaatcctgaaatccgttaacattccagtcgggacggttccaatctac
caggctgcagcttccaggaaagttgttgtggaaatgacttcggatgatatgttcaacgcc
gtccggaaacatgccaaacagggagtcgactttgtgaccgtgcacgccggggttaactta
aactcacttgagcggctgcgccagagcgacaggatcatgaatgtcgtgagccgtggaggc
tcttttacccttgcctggatgctgcataacggagaagacaatcctttctatgccgaattt
gattatctacttgaaatcgcaaaagaatatgatatgactctgagccttggagacggcatg
cgtcccggctgcattgccgatgcctctgaccgcccgaagttcatggaatttatcacgctt
ggtgaactcgtaaagcgggcaagggctgccaatgtccagacttttgtagaaggtcccggc
catgtgcctttgaacgaaatcgaactcagcgttaggggcatgaaagagctctgtaatggt
gctcctctctatcttctgggcccgcttgtgactgatattgctcccggctttgaccacatt
acaggtgcaataggaggcgcagttgcagggatgtacggtacggatttcctctgcatggta
actccctcggaacaccttgctcttccagcccttgaggatataaaagaaggtctgctcgta
acaaaggttgcagcccacactattgaccttataaaagaaggcccgagagaacgcgcctgg
gaaaaggatcttgctatggcatatgcccgcagggaccttgactgggaaaaacagttcgaa
ctggcaatcgatggcaacagggcccgcaaaatccgggatgcccgaaaaactgaaagcgat
acctgttcgatgtgcggggatctctgtgctttgaaaatcgtaaaggaggcttttgagaat
aagaaaacggaagaatga
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