Methanosarcina barkeri MS: MSBRM_2430
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Entry
MSBRM_2430 CDS
T03838
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mby
Methanosarcina barkeri MS
Pathway
mby04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSBRM_2430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mby03019
]
MSBRM_2430
03009 Ribosome biogenesis [BR:
mby03009
]
MSBRM_2430
04131 Membrane trafficking [BR:
mby04131
]
MSBRM_2430
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mby04147
]
MSBRM_2430
Messenger RNA biogenesis [BR:
mby03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSBRM_2430
Ribosome biogenesis [BR:
mby03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSBRM_2430
Membrane trafficking [BR:
mby04131
]
SNARE
SNARE associated proteins
Others
MSBRM_2430
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSBRM_2430
Exosome [BR:
mby04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSBRM_2430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_2
AAA_14
TIP49
AAA_22
CDC48_2
AAA_33
NACHT
IstB_IS21
Sigma54_activat
RNA_helicase
ABC_tran
nSTAND3
NPHP3_N
Parvo_NS1
AAA_28
Mg_chelatase
AAA_24
AAA_7
AAA_18
NB-ARC
ATPase
AAA_lid_PRS2_C
TsaE
Zeta_toxin
SLFN-g3_helicase
Vps4_C
AAA_3
PhoH
AAA_11
AAA_17
Sigma54_activ_2
ResIII
AAA_25
DUF815
Motif
Other DBs
NCBI-ProteinID:
AKB55428
UniProt:
A0A0E3QVC3
LinkDB
All DBs
Position
complement(3198877..3201168)
Genome browser
AA seq
763 aa
AA seq
DB search
MTDSKTTIKLKVAEADQRDVGKGIVRIGESFREKLGLKPFDVVEIKGEKSTSALIGRPYP
SDSGLEIIRMDGLIRINAKTSVGEYVDICKADWKEAKSVTLAPVSRGMQIYAPSETLKAV
FINRTVSKGDFISTTSLKKSRESETFGKGGMFEDFFQDFFDQGFGPSFGLGEIKLQVVSI
SPSGIVKITDLTQVELLPEATEVTSEQNIPTVMYEDLGGLKEAIGKVREMIELPLKHPEL
FDRLGIDAPKGVLLHGPPGTGKTLLAKAVANESDAYFISINGPEIMSKYYGESERAIREI
FEDAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTNR
PEALDVALRRPGRFDREIELRVPDTDGRLEIFQIHTRGMPLAEDVNLMDFAQITYGFVGA
DIAALCREAAMSALRKVLPKINLNEPEIPAEILDSLQVIREDFENALKDVQPSAIREILI
EVPTVSWDDVGGLEEVKRLLKEVVEWPLKNPESYRDIGVEAPKGVLLYGPPGTGKTLLAK
AIAHESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPIRGAS
ISEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDVIDPALIRPGRFDELILVPIPDE
GARREIFKVHTEKMALAEGIDIEKLVSMTDQYTGADIAAICKKAGRLALREDLHAKNVKQ
RHFIKAITETGPSVTSDTMKYYEAIKGELRIRKSKEIENPSYI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
ttgactgatagtaagacaacgataaaattgaaagttgcagaagccgatcaacgggatgtt
ggaaaaggcattgtccgaataggcgaaagtttccgggaaaaactgggtcttaagcctttc
gacgtcgtggaaatcaaaggggaaaaatcgacttcagcccttatcggacgcccgtaccct
agtgattcaggacttgagataatacgtatggatgggcttatccgcattaatgcaaaaacc
agtgtaggggaatatgtggatatctgcaaagccgactggaaagaagcaaaaagtgtaact
cttgcgcctgtatccaggggcatgcaaatctatgctccaagcgaaactcttaaagccgta
ttcataaaccgtacggtttcaaaaggggattttatttctaccacaagtttgaagaaatca
agggaaagtgagactttcggcaaaggaggtatgttcgaagatttcttccaggactttttc
gaccagggctttgggccgtctttcgggcttggagaaataaaattgcaagtagtttctatt
tctccgtctggaatagtaaagattacagacttaacacaagttgagcttttgcctgaagcg
accgaggtaacctctgaacagaatatccctactgttatgtatgaagatctaggtgggcta
aaagaagccattgggaaagttagggaaatgatagaattgcctttgaagcaccctgagctt
tttgacaggctaggaattgatgctccaaaaggggtactgctccatggcccgcccggaacg
ggaaagactctgcttgcaaaagcagttgctaacgaatccgatgcctactttatttcgatc
aatggtcctgagattatgtccaaatattacggcgaatccgaaagggcgataagggaaatt
ttcgaggacgcagaaaagaatgctcctgcaattatcttcctggatgagatcgattccatt
gcccctaaaagagctgaggtaaccggagaagtggaaagaagagtagttgctcaacttctc
tcccttatggatgggcttaaagcccgcaagaatgtaatcgttatagggtcaaccaaccgt
cccgaagccctggatgtagcactccgccgcccgggcagatttgaccgagaaattgaactt
agagtcccggatactgatggaaggttagaaattttccagatccataccagaggaatgcct
cttgccgaagacgtaaacctcatggattttgctcaaataacatacggattcgtaggagct
gatattgctgccctgtgcagggaggcagctatgagtgccttacggaaggttttacctaaa
atcaatcttaatgaacctgaaatcccagctgaaattctggattccctccaggtaataaga
gaagattttgaaaatgctctcaaagatgtccagccttcagcaataagggaaatccttatc
gaagtgccaactgtcagctgggacgacgtcggcggtctggaagaagtaaaaaggctcctg
aaagaggtcgtagaatggcctcttaagaatccggaatcttacagagatatcggggttgaa
gctcctaaaggggtccttctgtatggccctccgggtacgggaaagactctgcttgcaaag
gcgatagctcatgaatcggatgctaattttatcacagccaagggaagtgatctactttcc
aaatggtatggagaatccgaaaaaaggatagctgaggtttttacacgggcaaggcaggtt
gctccatctattattttcctggacgaacttgactcacttgcgcctattcgcggggcttct
ataagtgagcctcaggttacggcaagaatccttaatcagcttctctccgaaatggacgga
cttgaagagctcagggctgtagtggtaattggtgcaaccaatcgcccggacgttatcgat
cctgcacttatccgaccaggacgttttgatgaactgattcttgttcctattcctgatgag
ggagctcgcagggagatcttcaaagtccataccgaaaaaatggcgcttgcagagggtatt
gatatcgaaaagctcgtttctatgactgatcagtatacaggtgcagacattgcagccata
tgtaaaaaggcaggaaggcttgctctgcgtgaggatcttcacgcaaaaaatgttaagcag
agacacttcattaaagcaataacagaaactggaccttcagtcacttcggacacgatgaaa
tactacgaagctataaaaggcgaactcagaattaggaaatctaaagaaatcgagaacccc
tcctatatttaa
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