KEGG   Methanosarcina barkeri MS: MSBRM_2433
Entry
MSBRM_2433        CDS       T03838                                 
Name
(GenBank) Replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
mby  Methanosarcina barkeri MS
Pathway
mby03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mby00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSBRM_2433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mby03032]
    MSBRM_2433
DNA replication proteins [BR:mby03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MSBRM_2433
SSDB
Motif
Pfam: AAA RCF1-5-like_lid Rad17 RuvB_N AAA_22 AAA_14 AAA_16 AAA_6 AAA_assoc_2 AAA_33 nSTAND3 AAA_30 IPT TsaE DNAX_ATPase_lid NACHT DUF815 IstB_IS21 RNA_helicase AAA_28 AAA_5 AAA_7 Cytidylate_kin PPV_E1_C TIP49 AAA_18 UBA_Rad5
Other DBs
NCBI-ProteinID: AKB55431
UniProt: A0A0E3LNV5
LinkDB
Position
complement(3204655..3206610)
AA seq 651 aa
MTLAIEWAEKYRPQTLKEIVGNKKAVQDLRTWAEKWLSGIPERRAVILHGPAGVGKTSTA
HALARDLGWEVIELNASDQRTAGVIEKVAGSAASMNTLFGGKRLIILDEADNIHGTADRG
GMRAIAGIIKSTLQPIVLIANDIYGLTPTIRNLCLEIKFGSVQSRSMVPALKKVCESEEI
LCSPDAVQKIAEGAGGDLRSAINDLQAAATGRKALEVEDISTSGRDVKENIFKAMQRIFK
STDCKKALEASRGLDESPEDLVHWIDENLPFQYASKDGNLEDIKTGFGYLSRADLYLGRV
KKRQNYGMWRYASMLMVCGTAVSKTRPYPGFIKYQSPSLWKKMGQIRSKRNLRDNIASKV
GEHNFESMRYSRNNLLELYSLMLKNEESAIEITAGLGLELEELIYLSGSTKASKKLQKIY
DRAQELLLEGKESDGTEFFRAPASSENSKEDLSSFLIKTPKEKAGKHSESLEVPNSRTSQ
GGQKTLNFGLDISLEITPETTNSENNTSDILTPDSLTPDTLTSDALTPDALTSDALMPDS
VTSNTLIPEQNQARLNEVELKPGSLTSSLSEHDNLKVKNSSSLPEPFEKEAFSGSEPIEN
SISLEFSRSREPITRELIVKKVSDKSEKSEVKASETPKKAESKTQKTLFDF
NT seq 1956 nt   +upstreamnt  +downstreamnt
atgacgttggcaattgaatgggctgagaaataccgcccacagaccctgaaggagattgta
gggaacaagaaggcggtgcaggatttgcggacctgggctgagaagtggctttcaggcatt
ccagagaggagggcagtgatccttcatggacctgcaggagtagggaagacctctactgcc
catgctcttgcccgcgatctgggctgggaagtcatcgaactcaatgcaagtgaccagagg
actgcaggtgttattgaaaaggttgcgggatcggcagcttcaatgaataccctctttgga
ggaaaacgtctgattatcctggacgaagcggacaatattcacgggactgcagacaggggt
ggaatgcgagctattgcaggaattataaagagcacacttcaacccatagtgctgattgca
aacgatatttatgggttgactcctactatcaggaacctctgtctggaaataaagttcggg
tccgtacagagccgttctatggtccctgctttgaagaaggtctgcgagagcgaagaaatt
ttatgcagcccggatgcagtccagaaaatcgctgaaggggcgggaggagatctaagaagt
gcaattaacgaccttcaggctgcagctaccggaaggaaagcgctggaagttgaggatatc
agcacttcaggcagagatgtaaaagaaaacatcttcaaggcaatgcagagaatctttaag
agcacggactgtaaaaaggctttggaagcatctcgtgggcttgatgaaagccctgaagat
cttgtacactggatagatgaaaacctgcctttccagtatgcatctaaggatggaaatctt
gaggatataaaaactggctttggttatctctcaagggccgatctttaccttgggcgcgta
aaaaaacgccagaactatgggatgtggaggtatgcgagcatgttgatggtctgcggaact
gcagtctcaaagacacggccataccccggatttatcaagtatcagtctccttctctctgg
aagaaaatggggcagatacgttcgaaacgaaacctcagggataatatagcttctaaagtt
ggagaacacaacttcgagtccatgcgttattcaagaaataatctgctggagctttactct
ctcatgttaaagaatgaagaatccgcgatcgaaattactgcgggcctcgggcttgaactt
gaggagttgatatatctctcggggagcacaaaagctagtaaaaagctgcagaaaatctac
gacagggcgcaggaacttctccttgaaggaaaagaatctgatggaactgagtttttcagg
gctcctgcctcctcagaaaatagtaaagaggacctttctagcttcttgattaaaactccg
aaggaaaaagctggaaaacattccgagagtctcgaagttcccaactccaggacttcacag
ggcgggcagaaaactcttaactttggtcttgatatctcacttgagattactccagaaact
acgaactcggaaaataatacttccgatatccttacacctgattctcttacacctgatact
cttacatctgatgcccttacacctgatgctcttacatctgatgcccttatgcctgacagt
gttacttccaatactcttataccggaacagaatcaggccaggcttaatgaggtcgagctc
aaacctggtagccttacatccagtttatctgaacacgataatcttaaggttaagaattct
tcatccctgcctgaaccttttgagaaggaagctttttctggctctgaacctatagaaaat
agcatctctctcgaattttccagatccagggaacctataactcgtgagctcattgtcaaa
aaagtttcagataagtctgaaaaatctgaggtcaaagccagtgaaactcctaaaaaagct
gagtcaaaaacacaaaaaacgcttttcgacttctaa

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