Methanosarcina barkeri MS: MSBRM_2577
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Entry
MSBRM_2577 CDS
T03838
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBRM_2577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mby03021
]
MSBRM_2577
Enzymes [BR:
mby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBRM_2577
Transcription machinery [BR:
mby03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBRM_2577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_7
Fer4_9
Fer4
Fer4_6
Fer4_10
Fer4_16
Fer4_8
Fer4_21
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
AKB55575
UniProt:
A0A0E3QXL5
LinkDB
All DBs
Position
complement(3406215..3407009)
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AA seq
264 aa
AA seq
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MEVDILELSDRSAKFVLSNVSTSFANGIRRAMIADVPTLAIEYVNLYDNTSVLYDEQLAL
RLSLIPLVTDVETYVPQAECDVCGGEGCPACEVSLTLSAEGPCTVYSRDLISSDPKIQPA
DLNIPIVELKKGQKLVLEALAHMGYGRDSVKWQAGIACGYKNVPVITIENCDACGHCAAE
CPKGIIRFEESGARVSDEDILKCSLCKLCEQVCDIHAINISFDENAFVFTMESDGSYTAK
DLALNAADVVKGKAEELLSILDQF
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagacattctggagttatcggatagatctgcaaaattcgtgctttcaaatgtt
agcacatcttttgccaacggcattcgacgcgccatgatcgcagatgtaccaacgcttgcg
attgaatatgtgaacctttacgacaatacctcggtactctatgatgagcagttggctcta
cgtctgtccttaatcccgcttgttacggatgtagagacgtatgtgccacaggcagaatgc
gatgtctgcggaggagagggctgtcctgcctgcgaggtttccttaaccctaagtgcagaa
ggtccatgcacggtttattctcgggatcttatttcctctgacccgaagatacagccggct
gatctcaatatccctattgttgaactgaaaaaagggcagaagcttgtgcttgaggccctc
gctcatatgggctatggcagggatagtgttaaatggcaggcaggaatcgcttgcggctac
aagaacgtgcctgttataaccattgaaaactgcgatgcatgcgggcactgtgcagccgaa
tgtccgaaaggcattatacggtttgaagagtcaggtgccagagtttctgacgaagatatc
ctgaagtgctcactctgcaagctctgcgagcaggtctgtgacatccacgcaataaacatt
agcttcgatgagaacgcttttgtgtttacaatggagtccgatggttcttataccgccaaa
gaccttgcccttaatgcagcagatgtggtcaaaggcaaagctgaagaacttttgagcatt
ctggaccagttctga
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