Methanosarcina barkeri MS: MSBRM_2895
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Entry
MSBRM_2895 CDS
T03838
Name
(GenBank) Formate dehydrogenase beta subunit
KO
K00125
formate dehydrogenase (coenzyme F420) beta subunit [EC:
1.17.98.3
1.8.98.6
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby00680
Methane metabolism
mby01100
Metabolic pathways
mby01120
Microbial metabolism in diverse environments
mby01200
Carbon metabolism
Module
mby_M00356
Methanogenesis, methanol => methane
mby_M00357
Methanogenesis, acetate => methane
mby_M00563
Methanogenesis, methylamine/dimethylamine/trimethylamine => methane
mby_M00567
Methanogenesis, CO2 => methane
mby_M00617
Methanogen
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
MSBRM_2895
Enzymes [BR:
mby01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
MSBRM_2895
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.3 formate dehydrogenase (coenzyme F420)
MSBRM_2895
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FrhB_FdhB_C
FrhB_FdhB_N
Fer4_9
Fer4_8
Fer4
Fer4_17
Fer4_10
Fer4_7
Fer4_2
Fer4_6
Fer4_16
Fer4_4
Fer4_18
Fer4_20
Fer4_3
Fer4_13
Fer4_21
Fer4_Nqo3
Motif
Other DBs
NCBI-ProteinID:
AKB55893
UniProt:
A0A0E3QYB1
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All DBs
Position
complement(3787761..3788966)
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AA seq
401 aa
AA seq
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MKPSEGDMFYVQACDQKLLEKGESGGAVSALLKFALESGSVDAVLGVRKGADIYDAVPVL
ITDPAEISEISGSLHFGTLLLSRLFSKYLEKAENLKIAVALKGCDVMGLYELAKRGEVRL
ENVLMLGLNCGGSISPEMARKMIVETFAVNPDLVKKERIAKGKFIVETPEEEFSIPIDKL
EEANFGRRSNCRRCKLKIPRQADLACGEWGVMGMEATFVEVCSAKGAELLKQAKTAGVVE
TFPPVPKGVEIRGKIEKSMLKLAEGWREKDFQSLGEGKTRLKQLVDETSRCIKCYTCIEV
CPALSGTKVSDFTITPGKVPPSFAFHALRYSLVADSCINCGQCEELCPMDIPNALFMHSF
AVEFQELYGYQAGQDLSVPNISPLEIFRQKESRKKSGCKKN
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccgtcagaaggagacatgttttatgtccaggcttgtgaccagaaattactggaa
aaaggtgagtcaggcggtgcggtttcagctctattgaaatttgcactggaaagcggaagt
gtggatgcggtgctcggggtcaggaaaggagccgacatctatgatgctgtacctgtgctg
attacggacccggcagaaatttcggaaatttcgggttccctgcatttcgggacccttctt
ctgtccaggcttttcagcaagtacctggaaaaggcagagaacctgaaaattgcagtcgcc
ctgaaaggatgcgatgtcatgggtctttatgagcttgcaaagcggggagaagtcaggctg
gaaaatgtcctcatgcttgggctaaactgcggaggctcaataagtccggaaatggcaagg
aagatgattgtagaaacgtttgcagttaaccctgacttggttaaaaaggaaaggattgct
aaggggaagtttatcgttgaaactcctgaagaggagttttctatacccatagacaaattg
gaagaggcaaactttggaagaagaagtaactgcaggcgctgcaaactgaaaattccaagg
caggctgatcttgcctgtggagaatggggcgttatgggtatggaagcaacctttgttgag
gtatgcagcgcaaaaggcgcagaactacttaaacaggcaaaaactgcaggcgtggttgaa
acttttccccctgtcccaaaaggtgtggagattcgggggaaaatcgaaaagtcgatgctg
aagctggccgagggctggagagaaaaagattttcagtcgttaggggaaggaaaaacccgc
ctgaaacagcttgtggatgagacttcacgttgcatcaagtgctatacctgcattgaagta
tgtcctgccctgtccggaacaaaagtatcagactttactatcacccctggaaaggttcct
ccatcctttgcctttcatgcactacgctattctcttgttgcagattcctgtatcaactgc
ggacaatgcgaagaactctgtccaatggatatcccaaatgccctttttatgcattccttt
gctgtggaatttcaggaactctacggctatcaggcagggcaggacctctccgtcccgaat
atctcaccattggaaattttccgtcagaaagaaagcaggaaaaaatcaggttgtaaaaaa
aattga
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