Methanosarcina barkeri MS: MSBRM_3096
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Entry
MSBRM_3096 CDS
T03838
Name
(GenBank) Deoxyribodipyrimidine photolyase, type II
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mby
Methanosarcina barkeri MS
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mby03400
]
MSBRM_3096
Enzymes [BR:
mby01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MSBRM_3096
DNA repair and recombination proteins [BR:
mby03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MSBRM_3096
Prokaryotic type
MSBRM_3096
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AKB56094
UniProt:
A0A0E3QZ09
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Position
complement(4014671..4015993)
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AA seq
440 aa
AA seq
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MSRDQRVEDNWALLFARKIALEADVPFFVVFCLVDGFLEAIRRQYEFMLRGLQEVEATLA
RKKIPFFFLRGDPEEEIPYFIEKHEIGTLVTDFSPLRIKRTWTKKVASGIKVPFFEVDAH
NVVPCWEASKKQEYAAHTFRPKLLKLLPEFLTEYPELEANLEFPEIVMISGKSETFSEVQ
KSGFETRLPGEFLKEKAGFLPDIALFEAGETAARKVMAEFLTNKLDSYSTLRNDPTKDAL
SNLSPYLHFGQISAQRVALKVEKAKADLKSKRVFLDELLVRKELADNFCYYNPFYDSFDG
FPEWAKKTLNSHRHDQKSHVFTLEELETGRTYDPLWNASQIELLSRGKMHSYMRMYWAKK
ILEWSESPEKALETAIYLNDKYELDGRDPNGYAGIAWSIGGVHDRAWKEREIFGKIRYMS
YEGSNRKFDVKSYIEKYSAL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgaccagagggttgaggacaactgggctcttctttttgcccgaaaaatagcg
ttggaagccgatgtgcctttttttgtggtcttttgtctggtagatggatttctggaagct
ataagaagacaatatgagtttatgctcagagggctgcaggaagttgaagctacccttgca
aggaaaaaaattccattctttttccttcgaggagaccctgaagaagaaattccatatttt
attgagaaacatgagattggaactcttgttactgattttagtccacttaggattaagagg
acatggacaaaaaaagtcgcatcaggcattaaggtacccttctttgaggtggatgctcat
aacgtagttccctgctgggaagcttctaaaaagcaggaatatgctgcccatactttccgt
cctaagctcttaaagctccttcctgaattccttacggagtatcctgagcttgaagcaaat
ctcgaatttcctgaaatcgtcatgatatccggaaaatctgaaacgttttcagaagttcaa
aaaagtggatttgaaactcgtcttccaggggagtttcttaaagaaaaagccggtttctta
cctgatatcgcgcttttcgaagctggagaaacagctgcacgaaaagttatggctgaattt
ctcactaataaacttgactcttactccaccctgcgaaatgacccaactaaagatgcctta
tccaatctctctccttatctgcattttggacagatctcggctcaaagggtagctctcaaa
gtagaaaaagcaaaagctgacttgaaatcaaaaagagtatttctcgatgagctccttgtg
cgtaaagagcttgccgataatttctgctattataatcctttttatgatagttttgatggc
tttcctgaatgggcaaagaaaacccttaattctcacaggcatgatcaaaaaagtcatgtc
tttacattggaagaactggaaacaggaaggacatacgatcctctctggaacgccagccag
atagaacttcttagtagagggaaaatgcacagctatatgcggatgtactgggcaaagaag
attctcgaatggagtgaatcgcccgaaaaagccctcgagactgcaatctacctaaatgat
aaatacgaattggacggacgagacccgaatggatatgcaggaattgcctggagtatcggg
ggagttcatgaccgcgcctggaaggaaagggaaatttttggaaaaataagatacatgagt
tatgagggtagtaatagaaagttcgacgttaaatcatatattgaaaaatattcagctttg
tag
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