Methanosarcina barkeri MS: MSBRM_3160
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Entry
MSBRM_3160 CDS
T03838
Name
(GenBank) Thiamin biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby00730
Thiamine metabolism
mby01100
Metabolic pathways
mby01240
Biosynthesis of cofactors
Module
mby_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MSBRM_3160
Enzymes [BR:
mby01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
MSBRM_3160
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
AKB56158
UniProt:
A0A0E3QX52
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Position
4094677..4095963
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AA seq
428 aa
AA seq
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MTIVEDAQKGIITEEMKIVAKNEGLDPEFIRRGVAAGRIVIPTSPYRQVKICGIGEGLRT
KVNASIGVSSDIVDVDMEIKKAQAAEAAGADTLMELGTGGDFLAIRKKVIDSISLSVGSV
PLYQAFIEAARKHGSIVDMTEDELFKATEDQAKLGTNFMAIHTGINNITMDRLKAHGRYG
GLCSRGGAFMTSWMLHNEKENPLYANFDYLVEILKEHEVVLSTGNGMRAGAIHDATDRAQ
IQELIINSELADRAHKQGVQVIVEGPGHVPLDQIGTNVKLMKEMSGHKPFYMLGPLVTDI
APGYDHIVTAIGASVSASYGCDFLCYVTPAEHLALPNLEDVITGVKTSKIAAHVGDMVKY
PDRAREQDLAMGRARRELDWEKMYSLAIDPEHAREVRNSRAPEDSDACTMCGNFCALKIV
NQNYNLAK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtggaagatgcacaaaaaggaattattactgaagaaatgaagattgttgca
aagaacgaaggacttgatcctgaattcatccgtcgtggtgttgcagccggaagaattgtt
attccaacctccccatacaggcaggtaaagatctgcggtataggagaagggctcaggacc
aaagttaatgcatccatcggtgtatcctcagacattgttgatgtagacatggaaattaaa
aaagcccaggctgccgaagctgcaggtgcagatacccttatggagctcggaactggtgga
gacttccttgcaatcaggaaaaaagtcattgacagcatttccctttcagtcggttcagtt
cctctttaccaggctttcattgaagccgcaaggaaacacggctcaatcgtggatatgacc
gaagacgaactcttcaaggcaaccgaagaccaggcaaagcttggaaccaacttcatggca
attcacacaggaatcaacaatatcaccatggaccgccttaaagcccatggcaggtacggt
ggcctctgttcccgtggtggcgcctttatgacttcctggatgctccacaacgaaaaggaa
aatccactttatgcaaactttgattaccttgttgaaatcctcaaggaacacgaagtagtc
ctttctaccggaaacggcatgcgtgcaggtgcaatccacgatgcaaccgaccgtgcccag
atccaggaattaattattaactccgaactggccgacagagcccacaagcagggtgtgcag
gtcattgtcgaaggtccgggccatgtccctctcgaccagataggaaccaacgtaaaactc
atgaaggaaatgagcggtcacaagccattctacatgctcggtccacttgtaactgacatc
gcaccaggctacgaccacatcgtaactgcaatcggagcatcggtttctgcttcatatggc
tgtgacttcctttgctatgtaactcctgcagaacacctcgcccttccaaaccttgaagat
gttatcacaggagtcaaaacctcaaagattgcagctcacgtaggcgatatggtaaaatat
ccagacagggcaagagaacaagaccttgctatgggcagagctagaagagagctcgactgg
gaaaagatgtactcacttgcaatagacccagaacacgcaagagaagtaaggaacagcagg
gctcccgaagattctgacgcctgcacaatgtgcggtaacttctgtgctctcaagatcgtc
aaccagaactacaacctcgcaaaataa
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