Methanosarcina barkeri MS: MSBRM_3487
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Entry
MSBRM_3487 CDS
T03838
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mby
Methanosarcina barkeri MS
Pathway
mby03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSBRM_3487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mby03019
]
MSBRM_3487
03012 Translation factors [BR:
mby03012
]
MSBRM_3487
Messenger RNA biogenesis [BR:
mby03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSBRM_3487
Translation factors [BR:
mby03012
]
Eukaryotic type
Release factors
MSBRM_3487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_LysW
Vps36-NZF-N
Zn_ribbon_DUF2089
HypA
Zn_ribbon_3
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AKB56485
UniProt:
A0A0E3QZQ5
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Position
complement(4493795..4495042)
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AA seq
415 aa
AA seq
DB search
MTEQSAHEKYEFKKKLESLRDKKGRSTELISLYIPADKQIFDVTNQLKDEHGQAANIKSK
LTRTNVQGAIESLLSRLRYLDKVPENGIVYFTGAIDIGANKTNMESEVIVPPEPITVYKY
HCDSSFYLEPLEDMLKDKGTFGLLVLDRREATVGLLVGKRIEAFRNLTSTVPGKQRKGGQ
SSHRFQQLRLIAIHEFYKRIGDAADDIFLAVEPKDLKGILIGGPSPTKEEFYAGEFLHHE
LMRKILGLFDTAYTDESGLSELVNAAADKLQDLELMGQKNAVRAFFKELISDSGKVAYGE
TQVRANLEINAVDVLLLSEDLRAERVTTKCSVCGYENKWTRRWKPGESAPTAGNCPNCGA
SLEVTDVTDIVDELSALADRSNAKVVFVSTDFDEGSQLMNAFGGIAAILRYSTGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatctgcacacgaaaagtacgaatttaaaaagaagcttgagagcctgagg
gataaaaagggaaggagtactgaactgatttctctttatatccctgctgacaagcagatt
tttgatgttacaaaccagttgaaagacgagcatggacaggctgcaaatatcaagtccaaa
cttaccaggactaatgtccagggggccattgaatctctcctttcaaggctcagatatctt
gacaaggttcctgaaaacggaatcgtttatttcacaggagccatagatatcggggctaac
aagacgaacatggagagcgaagtaattgtccctccagaaccaattactgtctataaatat
cattgcgactcctctttctatcttgagcctctggaggatatgctcaaggataagggcact
tttggacttttagtgcttgaccgcagggaagccacagtagggcttcttgtcggcaagcga
atcgaggctttccgcaaccttacctcaacggttccgggtaaacagaggaaaggtggtcag
agttctcatcgtttccagcagctcaggttaattgctatccatgagttctataagaggata
ggagacgccgcagatgatattttcctcgctgttgaacctaaagatcttaaaggtatcctg
ataggaggcccttctcctacgaaggaagagttctacgccggggagtttctgcaccacgag
cttatgagaaagatccttgggctctttgatacggcttacactgatgaatcagggctttcg
gaacttgtgaatgctgccgcagataagcttcaggatcttgagctaatggggcagaagaac
gctgtcagggccttcttcaaagaacttatttccgactcgggtaaagtagcctatggggaa
acccaggtacgagcaaaccttgaaatcaatgcagtggatgtgcttctgctttccgaagat
ctgcgggcagaaagggtaaccacaaagtgcagtgtttgcggatatgaaaataagtggaca
cggcgctggaaacccggggaatctgcacctacagccgggaattgtccaaactgtggagct
tcccttgaagtcacggatgttaccgatattgttgacgagctctcagcccttgctgacaga
agcaatgcaaaggtcgtttttgtgtctacagactttgatgaaggctcgcaacttatgaat
gctttcggaggcattgctgcaattctcaggtacagtactggagtttga
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