Methylococcus capsulatus: MCA0056
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Entry
MCA0056 CDS
T00205
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mca
Methylococcus capsulatus
Pathway
mca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCA0056 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mca03021
]
MCA0056 (rho)
03019 Messenger RNA biogenesis [BR:
mca03019
]
MCA0056 (rho)
Transcription machinery [BR:
mca03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MCA0056 (rho)
Messenger RNA biogenesis [BR:
mca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MCA0056 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_22
AAA_25
S1CSD-TOTE-2
Spore_III_AA
Mor
AAA
Motif
Other DBs
NCBI-ProteinID:
AAU90801
UniProt:
Q60CP9
LinkDB
All DBs
Position
complement(57326..58582)
Genome browser
AA seq
418 aa
AA seq
DB search
MNLTDLKRKPVSELIEIAESLDIEGVARTRKQDLIFSILKKLAKSGEDIYGDGVLEILQD
GFGFLRSPDSSFLAGPDDIYVSPSQIRRFSLRTGDTISGKIRPPKDSERYFAMLKVEQIN
YEPPENAKHKILFSNLTPLFPVQRFVLELGNGTTEDLTARVIDLVAPIGKGQRGLIVSPP
KAGKTMMLQNVAHSIAEKNPECYLIVLLIDERPEEVTEMQRSVKGEVVSSTFDEPPARHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALERPKRF
FGAARNIEEGGSLTIIATALIDTGSRMDEVIYEEFKGTGNMELHLERKIAERRIYPAINI
NRSGTRREEYLVDPDELQKSWILRKILQPMDEMAANEFLLGKLKDSKTNREFFDMMKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcactgacctcaagcgcaagcccgtatccgaactgatcgaaatcgccgaatcc
ctggacatcgaaggcgtcgcccgaacccgcaagcaggatctgatcttttcgatcctgaag
aaactggcaaaaagcggcgaagacatctatggcgacggggtgctggaaatcttgcaggat
ggcttcggattcctgcgctcgccggacagctccttcctcgccggacccgatgacatctat
gtgtcgccgagccagatccggcgcttcagcctgcgcaccggcgacaccatttccggcaag
atacggccgcccaaggacagcgagcgttatttcgccatgctcaaggtcgagcagatcaat
tacgaacctccggaaaacgccaagcacaagatcctgttctcgaacctgacgccgctgttc
ccggtccagcgtttcgtgctggaactgggcaacggtaccacggaagacctgaccgcccgg
gtgatcgacctggtcgcccccatcggcaagggtcagcgcggcctgatcgtatcgccgccg
aaagccggcaagacgatgatgctgcagaacgtcgcccattccatcgcagagaagaatccc
gagtgctatctgatcgtgctgctcatcgacgaacggccggaggaagtcaccgagatgcag
cgcagcgtcaagggcgaggtcgtctccagcaccttcgacgagccgcccgcacggcatgtc
caggtcgccgaaatggtcatcgaaaaggccaagcgtctggtcgaacacaaacgggacgtg
gtcatcctgctggattccatcacccgcctggcacgcgcctacaacacggtggtgccgtcc
tcgggcaaggtgctgaccggcggcgtcgacgccaatgccctggaacgtcccaagcgcttc
ttcggcgcggcccgcaacatcgaagaaggcggcagcctgaccatcatcgccaccgccctc
atcgacaccggctcgcgcatggatgaagtgatctacgaagagttcaagggcaccggcaac
atggaactgcatctcgaacgcaagatcgcggaacggcgcatctaccccgccatcaacatc
aaccgttcgggcacccgtcgcgaagaatacctcgtcgatccggacgaactgcagaaaagc
tggattctgcggaagatattgcagcccatggacgaaatggcggccaacgagttcctgctg
ggcaagctcaaggactcgaagaccaaccgtgagttcttcgacatgatgaaacgctaa
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