Methylococcus capsulatus: MCA0103
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Entry
MCA0103 CDS
T00205
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
mca
Methylococcus capsulatus
Pathway
mca00550
Peptidoglycan biosynthesis
mca01100
Metabolic pathways
mca01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MCA0103 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MCA0103 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mca01011
]
MCA0103 (mrdA)
Enzymes [BR:
mca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MCA0103 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
mca01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MCA0103 (mrdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AAU90710
UniProt:
Q60CK3
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All DBs
Position
109218..111053
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AA seq
611 aa
AA seq
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MNIRAARRFQNDVRVFQSRIAFSVVLLLLAVAALVVRLVYLQIVGHEHYATLSQDNRVKI
APLPPTRGVIYDRNGEVLADNVPSYSLELVPERIDDLDATLAELQTLLGLSDEDVRRFRK
LRSQHKSFESIPLKMRLDEEQIARFAVKQPFFPGVQIAVRMIRTYPYAELTAHAVGYVSR
ISEADLKTLDPSLYSGTYHIGKSGIEKTYETLLHGRTGHQELETNVQGRSIGVLNTVPPI
PGADLRLSLDITLQRAAVDALGDYNGAVVAMEPATGRVLAFVSKPSFDPNPFVYGIPKAD
YDRLQASPDRPLYNRALRGVYPPGSTVKPFEGLAGLEVGDLAADRKVSCPGYFQLPNSSH
QYRDWRKGGHGAVDLKSAITQSCDVYFYKLALSLGIDKLSEFMGRFGFGTRTGIDIPGEL
PGVYPSKEWKKKRSKYPWFPGETVITGIGQGYVGVTPVQLARATAILANRGRVVTPRLLD
GVQGGAGAAPEERRREELAIAPEHWDTVIQAMIDVVHSPRGTAKSIAGGLAYHVAGKTGT
AQVFSVAQGQKYRESEVSKEMRDHALFIAFAPAEQPRIAVAVIAEHGGHGGSVAAPVARA
VMERYLSGSAP
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccgagccgcccgcaggttccagaacgacgttcgggtattccagtcccgcatc
gccttcagcgtggtcctgctgctgctggcggtggcggcgctggtggtgcgtctggtttat
ctgcagatcgtcggtcacgagcactacgcgaccctgtcacaggacaaccgcgtcaagatc
gcaccgttgccgccgacacggggcgtcatctacgaccgcaatggcgaggtactggcggac
aacgtgccttcgtacagtctggaactggtgccggaacgcatcgacgacctggacgcaacg
ctggcggaactccagaccctgctcgggctgagcgacgaggacgtgcgccggttccgcaag
cttcgatcccagcacaagagcttcgagagcatccctctcaagatgcggctggatgaagaa
cagatcgcgcgtttcgcggtcaagcagccgttctttcccggcgtccagattgccgtgcgc
atgatccggacctatccttacgccgaactcacggcgcatgcggtaggctacgtcagccgc
atcagtgaggcggatctgaagacgctcgatccttcgctctacagcggcacttaccacatc
ggcaagagcgggatcgaaaagacctacgagacgttgctccacggccggaccggccatcag
gagctggaaaccaatgtgcagggccgctcgatcggcgttctcaacacggtaccgcccatc
ccgggggccgatctgcgcctgtcgttggacatcaccctgcagcgcgcggcggtcgacgcc
ctgggtgactacaacggtgcggtggtggcgatggagcccgcgacgggccgggtgctggcc
ttcgtcagcaagccgagcttcgatcccaatcccttcgtgtacggcattcccaaggcggat
tacgaccggctgcaggcctcgccggaccgtcctctgtacaaccgcgccctgcgcggcgta
tatccgccggggtcgacggtgaagccgttcgaagggctggcgggactcgaagtcggggac
ctcgccgccgaccgcaaggtgtcctgccccggctatttccagttgcccaattcctcccac
cagtaccgcgactggcgcaaaggcggccacggcgccgtcgatttgaaatcggcgatcacc
cagtcctgcgacgtgtatttctacaaattggccctcagtctgggcatcgacaagctgagc
gaattcatggggcggttcggcttcggcacgcgcaccgggatcgacattccgggtgagttg
ccgggcgtctatccctccaaggaatggaagaagaagcgcagcaaatacccctggtttcct
ggagagacggtcatcaccggcatcggccagggctacgtgggggtgacgccggtgcaactg
gcgcgggccaccgccattctggccaaccggggtcgcgtggtcacgccgcggttgctcgat
ggggtgcagggaggggccggcgcggcgccggaagaacgccgccgggaggaactggccatc
gcgccggagcattgggacacggtgatccaggcgatgatcgacgtcgtgcacagtccccgc
gggaccgcgaagagcatcgccggcggccttgcctaccatgttgccggcaagaccgggacg
gcccaggtcttctcggtggcgcaggggcagaaataccgggagtcggaggtgagcaaggag
atgcgggaccatgcgttgttcatcgccttcgccccggcggagcaaccccgcatcgccgtg
gccgtgatagccgagcacggggggcacggcggctcggtcgccgcgccggtcgcccgggcg
gtgatggagcgctatctgagcgggagcgccccatga
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