Methylococcus capsulatus: MCA1037
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Entry
MCA1037 CDS
T00205
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mca
Methylococcus capsulatus
Pathway
mca03420
Nucleotide excision repair
mca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MCA1037 (uvrD)
03430 Mismatch repair
MCA1037 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mca03400
]
MCA1037 (uvrD)
Enzymes [BR:
mca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MCA1037 (uvrD)
DNA repair and recombination proteins [BR:
mca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCA1037 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
MCA1037 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AAU92864
UniProt:
Q60A35
LinkDB
All DBs
Position
complement(1088886..1091066)
Genome browser
AA seq
726 aa
AA seq
DB search
MDITDIIAPLNEAQREAVTAPDRSLLVLAGAGSGKTRVLIHRIAWLLRAEGVSPHAILAV
TFTNKAANEMKARLEALLDLSTRDLWVGTFHGLAHRLLRRHAADAGLHEGFQILDSDDQY
RLIRRLLKTLELDEARWPPRQIQWYINAQKDQGRRARNLPDSYDPFERQMRRIYLAYEEL
CQRSGLVDFAELLLRTHEFLRDNADVLAHYQERFQHVLVDEFQDTNDVQYAWLRLLTQDR
DNLSVVGDDDQSIYGWRGAKVENLHRFRRDYPRHRMIRLEQNYRSTGNILSAANTLIARN
EGRLGKNLWTEGGRGEPISVYAAFNEQDEAGFVVNRIGRWVREGGRRSDAAILYRSNAQS
RQFEERLLAHGIPYRVYGGLRFFERAEIKDALAYLRLMANRHDDPGFERVINTPTRGIGA
KTLDLVRELARFERLSLWSAARKLIADNVLPARATGALAGFLDLVETMAGAAQGRALWEQ
VELAVKGSGLLEHYRKEKGEQAEARVENLEELVGAARQFELSPLIDPELGGLDQFLAHAA
LEAGENQGETFEDCVQLMTLHAAKGLEFDLVFLVGLEEGLFPSLQSLEDPARLEEERRLC
YVGITRARRKLYITHAECRRLYGKETYPRRSRFLRELPPDCLEEVRMKGGVSRPVASAMQ
SGDASAMLGADAPGEFRLGQRVRHGKFGEGVILQREGDGAQARVHVNFAEVGAKWLMLAY
AKLEPI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaccgatatcatcgcccccctgaacgaagcccagcgtgaggccgtcaccgcg
ccggaccgctcactgctggtgctggccggcgccggcagtggcaagacccgcgtgctgata
caccgcatcgcctggctgcttcgggcggagggcgtctcgccgcacgccattctcgccgtg
accttcaccaacaaggcggcgaacgagatgaaggcgcggctcgaggcgctgctcgacctg
tcgacccgagacctgtgggtcggcactttccatggcctggcgcaccgcctcctgcgccgc
cacgccgccgacgccggactgcacgagggtttccagattctcgattccgacgaccagtac
cggttgatccgccggctgctcaagaccctggagctggacgaggcgcgctggccgccgcgc
cagatccagtggtacatcaacgcccagaaggatcaaggccgccgggccaggaaccttccc
gactcctacgacccgttcgaacggcagatgcggcggatctatctcgcctatgaggaactg
tgccaacgttccggcctggtggatttcgccgagctgctgctgcgcacccacgaattcctg
cgcgacaacgccgacgtcctcgcccactaccaggaacgcttccagcacgtactggtcgat
gaattccaggacaccaacgacgtgcagtacgcctggctgcggttgttgacccaggaccgc
gacaatctcagcgtggtgggtgatgacgaccagtccatctacggctggcgcggcgccaag
gtcgaaaacctgcaccgtttccggagggactatccgcgccaccgcatgatccgcctcgag
cagaactaccgttccaccggcaacatcctcagcgccgccaataccttgatcgcccggaac
gagggacggctcggcaagaatctgtggaccgagggcggccggggggaaccgatctcggtc
tatgccgccttcaacgagcaggacgaggccggtttcgtcgtcaaccggatcggccgctgg
gtgcgggaaggcggaaggcgcagcgacgcggccattttgtaccggtccaacgcccagtcg
cgccagttcgaggagaggctgctggcccacggcatcccctaccgggtctatggcggcctg
cgtttcttcgagcgcgccgaaatcaaggatgccctcgcctacctgcggctgatggccaac
cggcatgacgatcccggcttcgaacgggtcatcaacacgccgacccgcggcatcggcgca
aagaccctcgatctcgtccgtgaactggcgcgcttcgaacggctctcgctgtggagcgcg
gcacggaagctgatcgccgacaatgtgctccccgctcgggcgacgggcgccctggccggc
ttcctagatctcgtcgaaaccatggctggcgcggcccaggggcgggctctgtgggaacag
gtcgaactcgcagtcaaaggctcaggcctgctggaacattaccgcaaggaaaaaggcgag
caggcggaagcccgggtagaaaacctggaggaactggtcggcgccgcccgccagttcgag
ctgagcccgctgatcgatcccgaactgggcggcctcgaccagttcctcgcccatgcggcg
ctggaagccggcgaaaaccagggagaaactttcgaggactgcgtccagctcatgaccctg
catgcagccaagggcctggaattcgacctggtgttcctggtcggtctggaggagggcctg
tttcccagcctgcagtcgctggaagaccccgcccgccttgaagaagaacgccggctctgc
tacgtcggcatcacccgggcacggcgcaagctctatatcacccacgccgaatgccgtcgg
ctctacggcaaagagacctatccgcggcgatcccgtttcctgcgggaactgccgccggac
tgtctggaagaagtcaggatgaaaggcggtgtcagccggcccgtcgcatcggcgatgcag
tcgggcgatgcgtcggccatgctcggcgcagacgctccgggggaattcaggttgggccag
cgggtccgccacggcaagttcggcgagggcgtgatcctgcaacgggagggtgacggagcc
caggcgcgggtccatgtcaatttcgcggaggtgggcgcaaaatggctgatgttggcctat
gccaagctcgaaccgatctga
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