Methylococcus capsulatus: MCA1451
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Entry
MCA1451 CDS
T00205
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mca
Methylococcus capsulatus
Pathway
mca03030
DNA replication
mca03430
Mismatch repair
mca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCA1451 (holA)
03430 Mismatch repair
MCA1451 (holA)
03440 Homologous recombination
MCA1451 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mca03032
]
MCA1451 (holA)
03400 DNA repair and recombination proteins [BR:
mca03400
]
MCA1451 (holA)
Enzymes [BR:
mca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MCA1451 (holA)
DNA replication proteins [BR:
mca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MCA1451 (holA)
DNA repair and recombination proteins [BR:
mca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MCA1451 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AAU92549
UniProt:
Q608N9
LinkDB
All DBs
Position
complement(1541635..1542639)
Genome browser
AA seq
334 aa
AA seq
DB search
MRLRPDQLVEALDRGLAPLYVLSGDEPLQLGEAADAIRMAARDRGYGLRELFHVEPGFSW
STFLEAGDSVPLFGDRRILDLRLNAKPDKEGAAALLRYLDRPPADAILIVILPRLSRDEL
NTAWARAADRVGVIVQVWPLQGRELVAWLDRRMNRLGLLADQSGLRLLAARVEGNLLAAA
QEIEKLHILYGAGRIEDEQILAAVCDCARYDVFDLTTAMLEGHTLRTLRILYGLEGEGVA
PPVVLWAITRELRSLAVVQKDTTRGLPMDGVLARLRIFDKRKEAFARAAKRLDRDGVLDA
IRLCCRVDRVAKGLEPGNPWLGLADVCLRIATSH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttgaggctgaggcctgatcaactggtcgaggcactggatcgcggcctggccccgctctac
gtgctgtccggcgacgagcccctgcagttgggggaggccgcggatgccatccggatggcg
gcacgcgaccggggctatggacttcgcgaactgtttcacgtcgagcccgggttcagctgg
agcacttttctggaggccggcgattccgtgcctctgttcggcgaccggcgtatcctggat
ctgcgcctcaacgccaagcctgacaaggaaggtgctgctgcgctgctgcgctatctcgac
cggccgcccgcggatgcgatactcatcgtcatcctgccacgcttgagccgggacgagttg
aataccgcctgggcacgggccgccgacagggtcggcgtcatcgtgcaggtctggccactg
caaggacgcgaactggtcgcctggctggaccggcgcatgaaccgcttgggtttgctggcg
gatcagtccggattgcggcttttggccgcacgggtggaaggcaatctgctggccgccgcc
caggaaatcgaaaaactgcacatcttgtacggcgccggccggatcgaggacgagcagatc
ctggcggctgtctgcgactgtgcgcgctatgacgtgttcgatctcaccacggcaatgctc
gaaggccacaccctccgaacattacgcatcctgtacggcttggaaggcgaaggcgtggca
ccgccggtggtgttatgggccatcacccgtgagctgcgctcactggctgtggttcagaag
gacaccacgagggggctgccgatggacggcgtgctggcccgcctgcggatattcgacaag
cgcaaggaggcattcgccagagccgccaaacggctcgaccgggacggcgtgctggatgcc
atccggttatgttgtcgggtagatcgggtagccaaagggctggagccggggaatccctgg
ctcggtctggccgatgtctgccttcgcatagccacttcccattga
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