Methylococcus capsulatus: MCA1574
Help
Entry
MCA1574 CDS
T00205
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mca
Methylococcus capsulatus
Pathway
mca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCA1574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mca03019
]
MCA1574
03009 Ribosome biogenesis [BR:
mca03009
]
MCA1574
Enzymes [BR:
mca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MCA1574
Messenger RNA biogenesis [BR:
mca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MCA1574
Ribosome biogenesis [BR:
mca03009
]
Prokaryotic type
rRNA helicases
MCA1574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DUF6683
UvrA_inter
CMS1
DUF3475
GMT-wHTH
Cas3-like_C_2
LytM_N
Cas_CT1975
Motif
Other DBs
NCBI-ProteinID:
AAU92154
UniProt:
Q608C3
LinkDB
All DBs
Position
1671149..1672648
Genome browser
AA seq
499 aa
AA seq
DB search
MLAPTRELALQVAEAFQSYARHLPDFHILPIYGGQSMDAQLRHLRRGVHVIVGTPGRVID
HLRRKSLNLDGLRTLVLDEADEMLRMGFIEDVEWILEHTPPERQIALFSATMPEAIRRVA
KRHLRHPKEAKIEAKTATVEAITQRYWLGSGAHKLDALTRILEVEDFDAMIIFVRTKVLT
EELAEKLEARGYSAAALNGDMSQALREKAVDRLKKNTLDILVATDVAARGLDVERISHVV
NYDIPYDTESYVHRIGRTGRAGRKGQAILFVTPREKRMLSAIEKATRQRITEMRLPTHQD
IAERRVEQFKAQIMTTLEEEDLEFFRRLVQQIGREQSLSPTDIAAALTYLVQKDRPLVPE
EQPAPAESPAESREPRKKFRDRDAEAGEKKRKRKDREETGVLYRIGVGRNDGAAAKDIVG
AIANEADIPGRDIGHIKLYDDFSTVSLPADLPKKSLKRLEKIWIVGKPIDIRLWTGGTTA
PQAVEKPKRKKKGYPKKNG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgctggctccgacccgcgaactcgccctgcaagtggccgaggccttccagagctatgcc
cgccacctgcccgatttccatatcctgccgatctatggcggccagtcgatggatgcacag
ttgcgtcatctgcgccggggagtccacgtcatcgtcggcacccccggccgggtgattgac
cacctgcgccgcaagagcctcaatctggatggcctgcgcacccttgttctggacgaagcc
gacgagatgctgcgaatgggcttcatcgaagacgtcgagtggatcctcgagcacactccg
cccgagcgccagatcgcactgttctccgccaccatgccggaagcgatccgcagggtcgcc
aagcgccacctccgccatcccaaggaggccaagatcgaggccaagaccgccacggtcgag
gcaatcacccagcgctactggctgggttcgggcgcgcacaaactggacgccctgacccgc
atcctcgaggtcgaggacttcgacgccatgatcatcttcgtccgcaccaaggtgctgacg
gaagaactggcggagaagctggaggcccgcggctattccgcagccgcgctgaacggcgac
atgagccaggctctgcgcgaaaaggcggtcgaccggctgaagaagaataccctggacatc
ctggtcgccaccgacgttgccgcccgcggcctggacgtggagcgcatcagtcacgtggtg
aactacgacatcccatatgatacggagagttatgttcatcgcatcggccgcaccggacgc
gccggacgcaagggacaggccatcctgttcgtcacaccgcgggaaaagcggatgttgagc
gccatcgagaaggccacccgccagcgcatcaccgagatgcgcctgcccacccaccaggac
atcgccgagcgccgggtcgaacagttcaaagcccagatcatgacgacgctggaagaggag
gatctggagttcttccgtcggctggtgcagcagatcggtcgggaacagagtctctcgccc
accgacatcgccgcagcgctcacctacctggtgcagaaggaccgtccgctggtcccggag
gaacagcccgccccggcggagtcccccgcggagagccgcgaaccgcgtaagaaattccgc
gatcgcgacgcagaagccggcgaaaagaaacgtaagcgcaaggatcgggaagaaaccggc
gtactctaccgtatcggcgtcggccgcaatgacggtgccgccgccaaggacatcgtcggc
gccatcgccaacgaggcggatatccccggccgggacatcggccacataaagctttacgac
gacttcagtacggtgagcctccctgcggacctgccgaagaaatcgctcaagcgcctggaa
aaaatctggatcgtcggcaaacccatcgacatccggctgtggaccggcggcaccaccgca
ccgcaggccgtcgaaaagccgaagaggaagaagaagggttatccgaaaaagaacggttga
DBGET
integrated database retrieval system
