Methylococcus capsulatus: MCA1898
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Entry
MCA1898 CDS
T00205
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mca
Methylococcus capsulatus
Brite
KEGG Orthology (KO) [BR:
mca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mca03009
]
MCA1898 (rumA)
Enzymes [BR:
mca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MCA1898 (rumA)
Ribosome biogenesis [BR:
mca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MCA1898 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
MTS
RrnaAD
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_23
PCMT
Methyltr_RsmB-F
Cons_hypoth95
TPMT
Methyltransf_15
zf-C3HC4_3
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AAU91827
UniProt:
Q606W5
LinkDB
All DBs
Position
complement(2044378..2045709)
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AA seq
443 aa
AA seq
DB search
MGHRGKRKPLPAEPIAAHIESFAHDGKGIAHVDGRVVFVDGALPGEDVTFVYTEIKRDYA
AGRVVEIVTASPDRVPARCRHFALCGGCSLQYLSEDAQIALKEDLLLDQFRRIGKVEPAA
QFPPLRGPHWGYRSRARLGARYVAKKGRELVGFREHASAKIVDMTDCPVLHPALGERIQA
FAELIEGLSLRERLPQIEAAVGEERTALVFRVLEDPTAEDFARLARFGKDQGLDVYIQRE
GRDSVAPVYPETAHDLSYSLPEWEVTFRFGPLDFTQVNMAINRQMIDQVMQALDPQPEER
VLDLFCGLGNFTLPLARRAGHVTGVEGGAEAVARAIRNAADNGIGNVEFHVADLSKPESC
GSWAGREYHKVLLDPSRSGALEILQCVPNWKAGRIVYVSCNPSTLARDAGILVHEYGYRL
LKAGVMDMFPHTAHVESIAVFER
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatcgaggcaaaagaaagccgctgccggccgagccgatcgcagcgcacatcgaa
tctttcgcccacgacggcaaggggatcgcccacgtcgacggccgggtggtgttcgtcgat
ggcgctttgccgggcgaagacgtcactttcgtctataccgaaatcaagcgtgactacgcc
gccgggcgggtggtggagatcgtcacggcctcgcccgaccgggtgccggcgcgttgccgg
catttcgccctgtgcggaggctgcagtctgcaatatctgtccgaagatgcccagatcgcc
ctgaaggaagatctgctgctggatcaattccgccgtatcggcaaggtcgaaccggcggct
cagttcccgccgctgcggggaccgcactggggttatcgcagccgggccaggctcggggcg
cgctacgtggccaagaagggcagggagctggtgggattccgcgaacacgcgagcgccaag
atcgtggacatgaccgattgtcccgtgctgcatccggcgttgggggagcgcatccaggcc
tttgccgagttgatcgagggtctttcgctgcgggaacggctgccacagatcgaggcggcg
gtcggcgaggagcgcacggcgctggtgttccgggtgctggaggatccgaccgccgaggat
ttcgccagactggctcggtttggcaaagaccagggtctggacgtctacatccagcgggaa
gggcgcgactcggtcgctccggtctatccggagaccgcacacgacctgagctacagcctt
ccggaatgggaagtgaccttccgcttcggtcccctggatttcacccaggtcaacatggcg
atcaaccgccagatgatcgaccaggtcatgcaggcgctcgatccccagccggaggaacgc
gtgctcgatctgttctgcggcctgggaaacttcaccttgccgttggcgcgccgcgccggc
cacgtcaccggcgtggagggaggcgcggaagcggtcgcgcgggcgatccggaatgcggcg
gacaacggtatcggcaacgtcgaattccacgttgccgacctgtcgaagccggaaagttgc
ggttcctgggccggccgggaataccacaaggtgctgctcgatccctctcgctccggcgcc
ctggaaatcctccagtgcgtgccgaactggaaagccgggcgcatcgtctacgtgtcctgc
aatccttccaccctggcacgcgatgccggcatcttggtccacgaatacggctatcgtctg
ctcaaggccggcgtcatggatatgtttccgcacaccgcccacgtcgagtccatcgcggta
ttcgagcgctga
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