Methylococcus capsulatus: MCA2347
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Entry
MCA2347 CDS
T00205
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mca
Methylococcus capsulatus
Pathway
mca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCA2347 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mca03021
]
MCA2347 (rpoA)
03400 DNA repair and recombination proteins [BR:
mca03400
]
MCA2347 (rpoA)
Enzymes [BR:
mca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCA2347 (rpoA)
Transcription machinery [BR:
mca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MCA2347 (rpoA)
DNA repair and recombination proteins [BR:
mca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MCA2347 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
AAU91500
UniProt:
Q605D7
LinkDB
All DBs
Position
complement(2540462..2541448)
Genome browser
AA seq
328 aa
AA seq
DB search
MHNSLAELIKPRTVEVVPHGSHSARVVIEPLERGFGHTLGNALRRVLLSAIPGAAVTDVV
IDGVLHEYSTIEGVQEDVIDVLLNLKNLAIRLNGPHDVYLNVDKHGPGPVLAGDIEASHD
VEVLNPELLIAHINGNGRLRMTLHVQKGRGYQPVANRAIEGDSAIGTLHLDASFSPIKKV
SYVVESARVEQRTDLDRLVIELQTNGTVQPEEAVKHAANILNQHLAILVDLKGEDLPLFG
EDGPQFDPLLLHPVDDLELTVRSANCLKAENIFYIGDLIQRSEADLLKTPNLGKKSLTEI
KDVLATKGLSLGMRLENWPPEGLKKLNQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcacaactcgcttgccgagctgatcaagccgcgtacggtggaggtggttccccacgga
agccattccgcacgtgtggtcatcgaaccgctagagcgggggttcggacacaccctaggc
aacgccttgagacgcgtgcttctttctgccattcccggtgcggcggtcacggacgtcgtc
atcgacggcgtgctgcacgaatattcgaccatcgagggggttcaggaggatgtcatcgac
gtgcttctgaatctcaagaatctcgccatccgtttgaacgggccacatgacgtttacctc
aatgtcgataagcacggccccggtccggttctggcaggcgacatcgaggcgtcccatgac
gtcgaagtgctcaatccggaattgctgatagcccacatcaacgggaacggccggctgcgc
atgaccctccacgtccagaagggaagaggctatcagcccgtcgccaaccgtgccatcgag
ggtgattcggccatcggcacgttgcatttggacgcgagtttcagtcccataaaaaaggtg
tcctacgtcgtcgagagtgcgcgcgtcgagcagcgtaccgacctggaccggttggttatc
gagttgcagaccaatgggaccgtgcagccggaagaggcggtcaaacacgccgccaacatt
ctgaaccagcatcttgctatcctggtcgacctgaagggcgaggatctgccgcttttcggt
gaggatgggccccagttcgatcccttgctactccatcctgtagacgatctcgaactcacg
gtgcgttcggcgaattgcctgaaggccgagaacattttctatatcggggatcttatccag
cgcagcgaggcagacttgctcaagactcccaatttggggaaaaaatctcttaccgagatc
aaggacgtgttggcgaccaagggattgtcgctcggcatgcgtttggagaactggccgccg
gaaggccttaagaagctgaaccaatag
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