KEGG   Methylococcus capsulatus: MCA2947
Entry
MCA2947           CDS       T00205                                 
Symbol
hup
Name
(GenBank) prophage MuMc02, DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
mca  Methylococcus capsulatus
Brite
KEGG Orthology (KO) [BR:mca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mca03032]
    MCA2947 (hup)
   03036 Chromosome and associated proteins [BR:mca03036]
    MCA2947 (hup)
   03400 DNA repair and recombination proteins [BR:mca03400]
    MCA2947 (hup)
DNA replication proteins [BR:mca03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    MCA2947 (hup)
Chromosome and associated proteins [BR:mca03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    MCA2947 (hup)
DNA repair and recombination proteins [BR:mca03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      MCA2947 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: AAU90945
UniProt: Q602W2
LinkDB
Position
complement(3128090..3128377)
AA seq 95 aa
MNQSQLINAIHEDANGSLTKTVIQRVLIALANVAQEALANGDEVTIPGVAKLTVKERAAR
TGRNPQTGETVEIPAKRVARASFVKALKERVQGGA
NT seq 288 nt   +upstreamnt  +downstreamnt
atgaaccaatcccaactcatcaacgccatccatgaagacgccaatggatcgctgaccaaa
accgtgattcagcgcgtcctgatcgccctggcgaatgtcgctcaggaagccctggccaac
ggcgacgaagtgacgatccccggcgttgccaagctcaccgtcaaggagcgcgcggcgcgc
accggccgcaatccgcagaccggtgagacggtggagattccagccaagcgagtggcgcgc
gcatcgttcgtcaaggcgctcaaagagcgcgttcaaggcggggcttga

DBGET integrated database retrieval system