Methylococcus capsulatus: MCA3002
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Entry
MCA3002 CDS
T00205
Symbol
lpdA
Name
(GenBank) pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mca
Methylococcus capsulatus
Pathway
mca00010
Glycolysis / Gluconeogenesis
mca00020
Citrate cycle (TCA cycle)
mca00260
Glycine, serine and threonine metabolism
mca00280
Valine, leucine and isoleucine degradation
mca00310
Lysine degradation
mca00380
Tryptophan metabolism
mca00620
Pyruvate metabolism
mca00630
Glyoxylate and dicarboxylate metabolism
mca00640
Propanoate metabolism
mca00670
One carbon pool by folate
mca00785
Lipoic acid metabolism
mca01100
Metabolic pathways
mca01110
Biosynthesis of secondary metabolites
mca01120
Microbial metabolism in diverse environments
mca01200
Carbon metabolism
mca01210
2-Oxocarboxylic acid metabolism
mca01240
Biosynthesis of cofactors
Module
mca_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mca_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mca_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mca_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MCA3002 (lpdA)
00020 Citrate cycle (TCA cycle)
MCA3002 (lpdA)
00620 Pyruvate metabolism
MCA3002 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
MCA3002 (lpdA)
00640 Propanoate metabolism
MCA3002 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MCA3002 (lpdA)
00280 Valine, leucine and isoleucine degradation
MCA3002 (lpdA)
00310 Lysine degradation
MCA3002 (lpdA)
00380 Tryptophan metabolism
MCA3002 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MCA3002 (lpdA)
00670 One carbon pool by folate
MCA3002 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mca04147
]
MCA3002 (lpdA)
Enzymes [BR:
mca01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
MCA3002 (lpdA)
Exosome [BR:
mca04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
MCA3002 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
AlaDh_PNT_C
NAD_binding_8
HI0933_like
FAD_binding_2
Thi4
DAO
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AAU90977
UniProt:
Q602R0
LinkDB
All DBs
Position
3177706..3179127
Genome browser
AA seq
473 aa
AA seq
DB search
MAEPKTIHADVLVLGGGPGGYTAAFRAADLGRQVVLVERYPTLGGVCLNVGCIPSKALLH
VAQIIHEAREAGEFGLRFGAPEIDLDQIRGFKDKVVKTLTGGLETLARQRKVTVVQGTGR
FTGEHGMQVETTDGPVTVGFDHAIIAAGSRAVKIPDFPHDDPRLMDSTDALALQEVPKRL
LIVGGGIIGLEMATVYHALGAGITVVELMDQLIPGCDADLVRPLHQHIKKQYENIYLKTR
VSRIEPEAAGLKVFFEGEGAPESDLFDRVLVAVGRAPNGALIGAENAGVHVDAKGFIPVD
EHQRTNVPHIYAIGDIVGNPMLAHKATHEAKVAAEVIAGKPSAFQALTIPSVAYTDPEVA
WMGVTEAQAKAQGIEYEKAVFPWAASGRALGIGRKEGATKLLCDKTTKRVIGAGIVGPHA
GELIAEAVLAMEMGADAEDIGLTVHAHPTLSETFAFAAEMIEGTITDLYIRKR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacccaagacgatacacgccgatgtcctggtgctgggcggtgggcctggcggc
tacaccgcggctttccgcgcggcggatctgggcaggcaggtggtcctggtcgaacgctac
ccgaccctggggggcgtctgtctcaatgtcggctgcatcccctccaaggctttgctgcac
gtcgcccagatcattcacgaggcacgggaagccggcgagttcggcctccggttcggcgcg
cccgagatcgatctggaccagatccgtggcttcaaggacaaggtggtcaagactttgacc
ggagggctcgagaccctcgccaggcagcgcaaggtgaccgtggtccagggcaccggccgc
ttcaccggcgagcacggcatgcaggtggaaacgaccgacgggccggtcacggtcggcttc
gaccatgccatcatcgccgcaggctcccgggcggtgaagattccagacttccctcacgac
gatccgcgcctgatggattcgaccgacgccctggcgctgcaggaagtccccaagcgcctc
ctgatcgttggcggcggcatcatcggcctggaaatggccacggtgtatcacgccctgggt
gccggtatcaccgtggtggaactgatggaccagctgatcccgggctgcgatgccgatctg
gtgcgcccgctgcaccagcacatcaagaagcagtacgagaacatctatctcaagacccgc
gtcagccggatcgaacccgaagccgccggcctcaaggtgttcttcgaaggggagggcgcg
cccgagtccgatctgttcgaccgcgtgctggtcgcggtggggcgcgccccgaatggcgcc
ctgatcggggcggaaaatgccggtgtccacgtcgatgccaaaggcttcatccccgtcgac
gagcaccagcgcaccaacgtccctcatatctacgccatcggcgacatcgtcggcaacccc
atgctggcccacaaggccacccacgaggccaaggtcgccgccgaagtcatcgccggcaaa
ccgtccgccttccaggcattgaccatcccatcggtggcctataccgatccggaagtggcc
tggatgggtgtcaccgaagcccaggccaaagcccagggcatcgaatacgaaaaagccgtg
ttcccgtgggccgcgagcggtcgcgccctgggcatcggccgcaaggagggcgccaccaag
ctgctctgcgacaagaccaccaaacgggtgatcggtgccggcatcgtcggcccccatgcc
ggcgagctcatcgccgaagccgtgctggccatggaaatgggcgccgatgcggaagacatc
ggcctcaccgtccatgcccacccgaccttgtcggaaaccttcgccttcgccgcggaaatg
atcgaaggcacgatcaccgatctctatatccgcaagcgctga
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