Mangrovimonas cancribranchiae: R3L15_02390
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Entry
R3L15_02390 CDS
T10204
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mcaa Mangrovimonas cancribranchiae
Pathway
mcaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R3L15_02390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaa03021
]
R3L15_02390
03400 DNA repair and recombination proteins [BR:
mcaa03400
]
R3L15_02390
Enzymes [BR:
mcaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R3L15_02390
Transcription machinery [BR:
mcaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R3L15_02390
DNA repair and recombination proteins [BR:
mcaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R3L15_02390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
WXA13730
UniProt:
A0AAU6P9V2
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All DBs
Position
521908..522900
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AA seq
330 aa
AA seq
DB search
MAVFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRME
GVDHEFSTISGVVEDVTEIILNLKQVRFKRQIEDVDNESVSIAISGQEQITAGDFQKFIS
GFQVLNPELVICNLDSKVNINMEITIEKGRGYVPAEENKKASAPVGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIITDGSINPQDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSYNKNDLMKFRNFG
KKSLTELEELVSVKGLSFGMDLSKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatttaattttcagaaaccagataaagtaatcatgatcgactcgacagatttc
gaaggtaaattcgaattccgtcctttagagcctggttacggattaacagtaggaaatgct
ttaagacgtgtgttattatcttctttagaaggttttgcaatcacatcggttagaatggaa
ggcgttgaccacgaattctcaaccatttcaggtgttgtagaagacgtaacagaaatcatt
cttaatttaaaacaagtacgttttaaaagacaaatagaagatgtagataacgaatctgta
tcaatagcaatttctggacaagagcaaattactgctggcgatttccaaaaatttatctca
ggattccaagtgttaaacccagaattagttatttgtaacttagattctaaggttaacatt
aacatggaaattactatagaaaaaggaagaggttatgttcctgcagaggaaaataaaaag
gcatctgcaccagtaggtaccatttttaccgattctatttacactcctataaagaatgta
aaatatagtattgaaaactatcgtgtagagcaaaaaacagattacgaaaaattagttttt
gaaattattacagatggttctataaatccacaagatgctttaactgaagctgcaaaaaca
ctaattcaccactttatgttattctcagatgaaagaataactcttgaagctgatgaaatt
gcacaaacagaaacttatgatgaagaatcacttcacatgagacaactacttaaaactaaa
ttagtagacatggatctttctgtacgtgctttaaactgtttaaaagcagccgaagtagat
actctaggagatttagtatcatacaataagaacgatttaatgaaattccgaaactttgga
aaaaaatcattaacagaactagaagagttagttagtgtaaaaggcttaagttttggtatg
gatttatcaaagtataaattagataaagaataa
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