Mangrovimonas cancribranchiae: R3L15_11315
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Entry
R3L15_11315 CDS
T10204
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mcaa Mangrovimonas cancribranchiae
Pathway
mcaa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mcaa00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
R3L15_11315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaa03021
]
R3L15_11315
Transcription machinery [BR:
mcaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R3L15_11315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
PgaD
UCR_14kD
DUF6285
PX
Motif
Other DBs
NCBI-ProteinID:
WXA12705
UniProt:
A0AAU6NWW8
LinkDB
All DBs
Position
2459150..2460013
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AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRESKSLDKYLQDISKMPLITAEEEVELAQRIREGDQQALDKLTTANLR
FVVSVAKQYQNQGLKLPDLINEGNAGLVKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QARIVRLPLNKIGSINKINKAYSHLEQAHQRPPSPEEIAKELDMTVSDVKQSMKNSGRHL
SMDAPLKEGEDSSLYDVVKSGESPNPDKELLKDSLNVEVNRALDTLSQREADVIRLYYGI
SNEQPMSLEEIGETFGLTRERVRQIKEKGIRRLRHSSKNKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagttaaaaattaccaagcaggttaccaacagagaatctaagtcacttgacaag
tatcttcaagatataagtaaaatgcccctaattacagctgaagaagaagttgagttagca
caacgtattcgcgagggagaccaacaagccttggataaattaacaacagccaacttacgt
tttgtggtttctgtagccaaacaatatcaaaatcaaggattaaaattacccgatttaatt
aacgaaggaaatgcaggtttggttaaagctgctaaaagatttgatgaaacacgcgggttt
aaatttatatcttatgccgtttggtggattcgtcaatccattttacaagcattagcagaa
caagctagaattgttcgtttaccattaaataaaattgggtccataaataaaatcaacaaa
gcgtattctcatttagaacaagcacaccaaagaccaccaagtccagaagaaattgctaaa
gaacttgacatgactgttagcgatgtaaaacagtctatgaaaaattcaggcagacattta
tctatggacgccccattaaaagaaggtgaagactctagtttatacgacgttgtaaaatct
ggcgaatctcctaatccagacaaagagttattaaaagactctttaaatgttgaagtaaat
cgcgctttagacaccttatcacaacgcgaagccgatgttattcgtttatactacggtata
agtaacgaacaacctatgagtttagaagaaataggagaaacatttggattaacaagagag
cgtgtaagacaaattaaagaaaaaggaattcgtagattacgacacagttcaaaaaacaaa
atattaaaaacttacttaggataa
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