Mangrovimonas cancribranchiae: R3L15_13730
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Entry
R3L15_13730 CDS
T10204
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mcaa Mangrovimonas cancribranchiae
Pathway
mcaa03410
Base excision repair
mcaa03430
Mismatch repair
mcaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R3L15_13730 (recJ)
03430 Mismatch repair
R3L15_13730 (recJ)
03440 Homologous recombination
R3L15_13730 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcaa03400
]
R3L15_13730 (recJ)
DNA repair and recombination proteins [BR:
mcaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
R3L15_13730 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
R3L15_13730 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
R3L15_13730 (recJ)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WXA13172
UniProt:
A0AAU6NVP8
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All DBs
Position
2964564..2966246
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AA seq
560 aa
AA seq
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MRWTLKPKPEPQKISQLQDALQVDEFVATLLVQRGIETYEDAKRFFRPSLSHLHDPYLMQ
DMDKAVARIEQAFANNERILVYGDYDVDGTTAVSLLSSYLHTRTDLVSTYIPDRYQEGYG
VSYKGIDFAEDNEFSLIIALDCGIKAVDKVTYAKEKGVDFIICDHHRPGKDIPKAVAVLD
PKRTDCNYPYKELCGCGVGFKLIQALAKNEGKTIKDLTHYLDLVAIAIGADIVPITGENR
VLAYFGLQVINNQPRPGIKALIAQVKKEELSITDVVFIIAPRINAAGRMKHGNHAVTLLT
ETDFNLAITFATEIEAFNTDRKEEDSRITDEALQQIIEQNETDRKTTVVYQEDWHKGVIG
IVASRLTETYYRPTLVFTKSGDKLAASARSVIGFDVYNALEACSEHIEQFGGHKYAAGLT
LHPENYEAFKQAFEDEVSQTIDSTLLTPEISIDAKIDLSDITSKFYRILKQFAPFGPGNR
TPVFMSEHLQDTGYGKQVGDGSHLRVTVTNGSQKIVGIGFGLGEKLSLISNKNPFKAVYS
IDENHWNGNVSLQLKLRDIK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggactttaaaaccaaaacccgaaccacaaaaaatatcacaactacaagacgcc
ttacaagttgatgaatttgtagcaactttgttagttcagcgtggtattgaaacgtatgaa
gatgctaaacggttttttcgtccaagtttaagccatttacacgatccgtacttaatgcaa
gatatggataaagctgttgcgcgtatagaacaagcttttgccaataacgaacgaatttta
gtgtatggcgattacgatgtggatggcacgacggcagtgtcgttactaagtagttactta
catacacgaaccgatttagtatcaacctatattcccgatcgttatcaagagggttatggt
gtttcttataaagggattgattttgcagaagacaatgagttttcacttattattgcctta
gattgtggtataaaagcagtcgataaagtcacctatgccaaagaaaaaggggttgatttt
attatctgcgaccatcatagaccaggaaaagacattccaaaagcagttgctgttttagac
cccaaacgaaccgattgtaattacccttataaagagctctgtggatgtggtgttgggttt
aagcttatacaagccttggcgaagaatgaaggaaaaaccattaaagatttaacccattat
ttagatttagtcgctattgctattggagccgatattgtccccattactggagaaaataga
gtgttggcttattttggattacaagtaatcaataatcagcctagacctggtattaaagca
ctaattgctcaagtgaaaaaagaagaattaagtattaccgatgtggtttttattatagca
ccacgcattaacgccgcaggaagaatgaaacacggcaatcatgctgtaaccttactaaca
gaaaccgattttaacttggcgattacttttgctacggaaatagaagcctttaataccgat
aggaaagaggaagatagccgtataaccgatgaagcccttcagcaaattattgaacaaaac
gaaaccgaccgaaaaaccacagtggtttatcaagaagattggcataaaggtgttataggc
atagtggcgtctcgactaaccgaaacgtattataggccaactctagtatttaccaaaagt
ggcgataaattggcagcttcagcacgatcggttattgggtttgatgtttacaatgcttta
gaggcttgtagtgagcatatcgagcaatttggaggtcataaatatgccgcaggattaacg
cttcacccagaaaattatgaagcttttaaacaagctttcgaggatgaagtctcgcaaaca
atagattcaaccttattaacaccagaaatttctattgatgccaaaatagatttaagcgat
ataacgtcaaaattttaccgtattttaaaacaatttgcaccttttggtccaggcaataga
acccctgtttttatgagtgaacatttacaagacacaggttatggaaaacaagttggcgat
gggtcgcatttacgtgttacggttaccaatggttctcaaaaaatagtaggcattgggttt
ggtttaggagagaaattatcgctaatctctaataaaaatccttttaaggccgtatattca
atcgatgaaaatcactggaatggtaatgtgtctttacaattgaagttgcgagatataaaa
tag
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