Micromonospora carbonacea: HXZ27_03390
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Entry
HXZ27_03390 CDS
T06722
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mcab
Micromonospora carbonacea
Pathway
mcab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HXZ27_03390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcab03400
]
HXZ27_03390
DNA repair and recombination proteins [BR:
mcab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HXZ27_03390
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HXZ27_03390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
nSTAND1
AAA_29
Viral_helicase1
AAA_25
UvrA_DNA-bind
AAA_16
DnaJ_CXXCXGXG
AAA_21
AAA_23
AAA_15
DUF7577
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
QLD28313
UniProt:
A0A7H8XTG2
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Position
complement(729303..731996)
Genome browser
AA seq
897 aa
AA seq
DB search
MRDPDRIVLRGVRQHNLRIGELSLPRGGLTVVTGVSGSGKSSLAFDTIYAEGHRQYLDSL
SAHVRRRLPKVARPTVDWVSGLSPTVAIEQRTISRNPRSNVGTITEISDRLRLLFARTGR
HDCRKCGTGVAPLDTAAHLAALAEAAAEGPVRLVAAEPDGGETEVLRLNAAPDADTLADA
GLLVERELRAERRLTVLRDRTPVRHLAAGWVCPHCGTEVHATSSEWFTPNSPAGMCDHCQ
GLGFTYRVDTARLVGDARESVRSGALTFYGDRRRGKKTWWPQRNLPDLLAEAGAGLDTPW
EDLAAAAADRILGDLTEHIERLFRDADSPERKAFYQGFMVQRQCGACGGTRHCAEALAVR
LAGRNIAEVNGLAVSRLRDWVGEVRAELAGNYLAALSAELLDQVDARVEFLLEVGLHYLS
LDRAAPTLSAGEGQRLRLARQLGSGLVGVVYVLDEPSIGLHARDNGRLIGMLRRLADAGN
TVLVVEHDRETMEAADHLVDMGPGAGTRGGLVVASGPTAEVVAHGTSATSAYLRNERAVV
SPRPERRRPDDRRLELTGARLNNLRGVDLIIPIGVLTCVTGVSGSGKSSLITRTLQPAVD
AAVRWRRTPVGPFDRLRGAEHVRRVTTVTQDSIGGSSRSTPATYLGVFDEIRKLFAGTDE
AVRRGYSTAMFSFNTEAGGRCDRCAGKGAVRIEMLFLADVSVRCPSCDGLRYSARVLEIT
HRGRTIAETLALEVGEAIELYADAPAISGPLRTLSQVGLGYLRLGQDTGTLSGGEAQRLK
LARELLRRDEGGTLYLIDEPTTGLHFSDVQVLLDVLHDLVDRDNTVVVIEHSVEFAAASD
WLVDLGPGGGEDGGRLVAAGPPELLATHPDSAIAPYLARQLALTAARRPAPETPGRR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggacccggatcgcatcgtgctccgcggtgtccgccagcacaacctgcggatcggg
gagttgtccctgccccggggcggcctgaccgtcgtcaccggagtctccggcagcggcaag
tcgtcgctggcgttcgacacgatctacgccgagggacatcggcagtacctcgacagcctc
tccgcgcacgtgcggcgcaggctgccgaaggtcgccaggcccacggtcgactgggtcagc
ggcctgagcccgaccgtggcgatcgagcagcggacgatcagccgcaacccacggtcgaac
gtcggcacgatcaccgagatctccgaccgcctgcgcctgctcttcgcccgtaccggacgg
cacgactgccgcaagtgcggcaccggggtcgcgccgctggacaccgccgcgcacctcgcc
gcgctggccgaggctgcggccgaggggccggtacggctggtggccgccgagccggacggc
ggcgagaccgaggtgctgcggctgaacgccgccccggacgccgacacgctggccgacgcc
gggctcctcgtcgaacgggagctgcgggccgagcggcggctgaccgtgctgcgggatcgg
acgccggtgcggcacctcgcggccggctgggtctgcccgcactgcggcaccgaggtgcac
gcgacgtcgtcggagtggttcacgccgaactcgccggccgggatgtgcgaccactgccag
gggctcggcttcacctaccgcgtcgacaccgcgcggctcgtcggcgacgcccgcgagtcg
gtccgctccggagcgctcaccttctacggcgaccgccgccggggcaagaagacctggtgg
ccgcagcggaatctgccggacctgctggccgaggcgggggcgggcctggacaccccctgg
gaggatctggccgccgcggccgccgaccggatcctgggcgatctgaccgagcacatcgag
cggctgttcagggatgccgactcgcccgagcgcaaggcgttctaccagggcttcatggtc
cagcggcagtgcggtgcctgcggcggcacccggcactgtgcggaggcgctcgcggtgcgc
ctggccggccgcaacatcgcggaggtcaacgggctggcggtctcccggctgcgggactgg
gtcggcgaggtccgcgccgagctggcgggcaactacctggccgcgctctccgccgaactg
ctcgaccaggtcgacgcccgggtcgagttcctcctcgaggtgggcctgcactatctctcg
ctcgaccgcgccgcgcccacgctctcggccggcgagggccagcggctccggctggcccgg
cagctcggatcgggtctggtcggcgtcgtctacgtgttggacgagccgtcgatcggcctg
cacgcgcgggacaacgggcggctgatcgggatgctgcgccggctggccgacgcgggcaac
acggtgctcgtcgtcgagcacgacagggagacgatggaggcggccgaccacctggtcgac
atggggccgggcgccgggacgcgcggcggcctggtcgtcgcgtccggtccgaccgccgag
gtcgtcgcccacggcacgtcggccaccagcgcgtaccttcgcaacgagcgggcggtggtc
tcgccccggccggagcgccgccgcccggacgaccgcaggctggaactgaccggcgcccgg
ctgaacaacctgcgcggcgtcgatctcatcatcccgatcggggtgctgacctgcgtcacc
ggcgtgagcgggagcggcaagagctccctgatcacccggacgctccagccggccgtcgac
gccgcggtgcggtggcggcgcacccccgtcggcccgttcgaccggctccgcggcgcggag
cacgtccgccgggtgacgaccgtgacgcaggactcgatcggcggctcgtcccggtcgacg
cccgcgacctacctgggggtgttcgacgagatccgcaagctgttcgccggcaccgacgag
gccgtgcggcgcgggtactccacggcgatgttcagcttcaacaccgaggcgggcgggcgc
tgcgaccgctgcgcgggcaagggcgcggtgcggatcgagatgctgttcctcgccgacgtc
tcggtgcgctgcccgtcctgcgacggcctgcggtactcggcgcgcgtcctggagatcacc
caccggggacgcacgatcgccgagaccctcgccctggaggtcggagaggcgatcgagctc
tacgccgacgcaccggcgatctccggtccgctccgcacgctgtcccaggtggggctcggc
tatctgcggctcgggcaggacaccggcaccctcagcggcggggaggcgcaacggctgaag
ctcgcccgcgagctgctccggcgcgacgagggcgggaccctctacctgatcgacgagccc
accaccggcctgcacttctccgacgtccaggtgctgctcgacgtcctgcacgacctggtc
gaccgggacaacacggtggtcgtcatcgagcacagcgtggagttcgccgccgcgagcgac
tggctcgtcgatctcggaccgggcggcggcgaggatgggggccggctggtcgcggccggc
ccgccggagctgctcgccacccacccggacagcgcgatcgcgccctacctggcccgtcag
ctcgcgctgaccgcggcccgccggcccgccccggagacgccggggcgtcgctag
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