Micromonospora carbonacea: HXZ27_09055
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Entry
HXZ27_09055 CDS
T06722
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mcab
Micromonospora carbonacea
Pathway
mcab00040
Pentose and glucuronate interconversions
mcab01100
Metabolic pathways
mcab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HXZ27_09055
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HXZ27_09055
Enzymes [BR:
mcab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HXZ27_09055
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Glyco_hydro_49
TrmE_N
Motif
Other DBs
NCBI-ProteinID:
QLD24339
UniProt:
A0A7H8XIT7
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Position
complement(2085681..2086646)
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AA seq
321 aa
AA seq
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MRITARRRTTLLAAAATASALVAGALTVATAPASAGPTDLVGWATQNGGTTGGGSTPATT
VTSASALTTAVGSSSAAVIRVSGAISCSGMLRVRSNKTILGNPGATISGCGFNISGDRNV
IIRNITFKSWNDDAINVQESATNIWVDHNTFTGGYDGAVDIKRGSDFVTVSWNRVYSHDK
SMLLGHSDDNASQDTGHLRVTYHHNWFDASTQRHPRVRFGNPVHVYNNYYYRNSGYGVAS
TMSAGVLVEGNYFESVSDPFHLGEGSSGPGTLVARNNYFVSSGSGQAGGSVKSIPYSYTL
DSASSVKSIVTGGAGAGRISV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcacggcacgacgtcgcaccacgctgctcgccgcagccgccaccgcctccgcc
ctcgtcgccggagccctcaccgtcgccaccgccccggcctcggccggacccaccgacctg
gtcggctgggccacccagaacgggggcaccacgggcggcggcagcaccccggccaccacg
gtcaccagcgcctccgcgctgaccaccgccgtcgggtccagcagcgcggcggtgatccgg
gtctccggcgccatctcctgctccggcatgctgcgggtccggtccaacaagaccatcctc
ggcaacccgggcgcgaccatcagcggctgcggcttcaacatcagcggcgaccgcaacgtg
atcatccgcaacatcacgttcaagagctggaacgacgacgcgatcaacgtgcaggagtcg
gcgaccaacatctgggtcgaccacaacaccttcaccggcggctacgacggcgcggtcgac
atcaagcgcggctcggacttcgtcaccgtgtcgtggaaccgggtctacagccacgacaag
tcgatgctgctcggccacagcgacgacaacgccagccaggacaccggccacctccgggtg
acctaccaccacaactggttcgacgcgagcacccagcggcacccccgggtccgcttcggc
aacccggtgcacgtctacaacaactactactaccgcaacagcggctacggcgtggcctcc
accatgagcgccggcgtgctcgtcgagggcaactacttcgagagcgtcagcgacccgttc
cacctcggcgagggcagctccgggcccggcaccctggtcgcccggaacaactacttcgtc
agctccggcagcggccaggccggcggcagcgtgaagagcatcccgtactcgtacaccctc
gacagcgcgagcagcgtcaagtcgatcgtgacgggcggcgcgggcgcgggtcggatctcg
gtctga
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