Micromonospora carbonacea: HXZ27_09390
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Entry
HXZ27_09390 CDS
T06722
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mcab
Micromonospora carbonacea
Brite
KEGG Orthology (KO) [BR:
mcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcab03016
]
HXZ27_09390
Enzymes [BR:
mcab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HXZ27_09390
Transfer RNA biogenesis [BR:
mcab03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HXZ27_09390
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QLD24394
UniProt:
A0A7H8XI18
LinkDB
All DBs
Position
complement(2164643..2165971)
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AA seq
442 aa
AA seq
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MTDEPPLRRRAAESRTGNEPHQPPSAAPEPVDAGPEPTVDGPVPLTAPREGTPEPVTTEA
GLAEVVARFAAGTGPVALDAERASGYRYSQRAYLVQLRRAGAGTALVDPLPLPDLSSLDA
AIADAEWVLHAASQDLTCLAEVGLRPRRLFDTELAARLAGFERVGLAALTEQLLGFSLEK
HHSAADWSSRPLPESWLTYAALDVEMLTDLRDVLDAELARQGKSAWAAEEFAALVRSVDR
PPRVRAEPWRRTSGIHRVRGARAQARIRALWYARDQIASRRDAAPGRVLPDSAIVAAAEL
DPRDEKTLLTLPGFGGRSVRRLARTWLAALDDARQLPDDALPVTPVVEGPPPPHRWAERD
PVAAGRLARCREVVVRIAGEHTLPPENLIAPDSIRRLAWTPPDEVSEATVAETLRGFGAR
EWQLTLLVADLAAALAGPAPAV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgaaccacccctgcgccgtcgggccgccgaaagccgaacgggaaacgagccg
caccaaccgccgtcggccgcgccggagccggtggacgcggggcccgaaccgaccgtcgac
gggcccgtgcccctgaccgccccccgcgaggggacacccgagccggtgacgaccgaggcc
gggctggccgaggtcgtggcccgcttcgccgccggcaccggcccggtcgccctggacgcg
gagcgcgcctcgggctaccgctacagccagcgggcgtacctggtgcagctgcgccgggcg
ggggccggcaccgcgctggtcgacccgctgccgctgcccgacctgagcagcctcgacgcg
gccatcgccgacgccgagtgggtgctgcacgccgccagccaggacctgacctgcctggcc
gaggtggggctgcgcccgcgccggctgttcgacacggaactggccgcccggctggcggga
ttcgagcgggtcgggctggccgcgctgaccgagcagctactcggcttcagcctggagaag
caccactcggcggcggactggtcgagccggccgctgccggagtcgtggctcacctacgcc
gcgctggacgtggagatgctgaccgacctgcgtgacgtgctcgacgcggagctggcccgt
cagggcaagtcggcgtgggcggcggaggagttcgccgcgctggtgcgcagcgtcgaccgg
ccgccccgggtccgggcggagccgtggcggcgcacctctggcatccaccgggtgcggggg
gcgcgcgcccaggcgcggatccgggccctctggtatgcccgggaccagatcgcctcccgc
cgggacgccgcgccgggccgggtcctgccggactcggcgatcgtggccgccgccgagctg
gacccgagggacgagaagacgctgctgaccctgccgggcttcggcggccggtcggtgcgc
cgcctggcccgcacctggctggcggcgctggacgacgcccggcagttgcccgacgacgcg
ctgccggtgacgccggtggtcgaggggccgcccccgccgcaccgctgggcggagcgggac
ccggtggcggcgggccggctggcccggtgccgggaggtggtggtccggatcgcgggcgag
cacaccctgccgccggagaacctgatcgccccggactcgatccgccggctcgcctggacc
ccgccggacgaggtgtccgaggcgacggtcgccgagacgctccggggcttcggggcgcgg
gagtggcagctcacgctgctggtggccgacctggccgccgcgctggcgggtccggcgccg
gcggtctga
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