Micromonospora carbonacea: HXZ27_11555
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Entry
HXZ27_11555 CDS
T06722
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mcab
Micromonospora carbonacea
Brite
KEGG Orthology (KO) [BR:
mcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcab03032
]
HXZ27_11555
03400 DNA repair and recombination proteins [BR:
mcab03400
]
HXZ27_11555
Enzymes [BR:
mcab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HXZ27_11555
DNA replication proteins [BR:
mcab03032
]
Prokaryotic type
DNA Topoisomerases
HXZ27_11555
DNA repair and recombination proteins [BR:
mcab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HXZ27_11555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Glyco_hydro_19
Motif
Other DBs
NCBI-ProteinID:
QLD24763
UniProt:
A0A7H8XI89
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All DBs
Position
2806918..2807901
Genome browser
AA seq
327 aa
AA seq
DB search
MRLRRSDPGRPGYGRLRRGRGWLFLDPAGDPVRDPDELGRLRELVIPPAWRDVWISPHPN
GHIQATGVDAAGRKQYLYHPRWRQQRDEEKFDHVLEVARRLPVLRERVGRDLTGRGLNRD
RVLATVTRLLDMGTFRVGSDQYAVGDDATFGVATLRPEHARSRGGCVVFAFPAKGGVEQV
RRIEDPQLCRVLANLRRRRRAADRLFGYWDGRGWRDVRSDEVNDYLRDASGGEMTAKDFR
TWHATVLAATELAGHVPARSVTARRRAVAAVMRQVAELLGNTATVARTSYVDPRVVDLFH
DGVVAPVVPGTPRAEAERRVLELLADA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgcggttacggcgtagcgacccgggcaggcccggatacggccgcctgcggcgcggccgg
ggatggctgttcctcgacccggccggcgacccggtgcgcgaccccgacgagctgggccgg
ctgcgggagctggtgatcccgccggcctggcgggacgtgtggatctcgccccaccccaac
gggcacatccaggccaccggggtcgacgcggccgggcgcaagcagtacctctaccacccc
cgctggcggcagcagcgcgacgaggagaagttcgaccacgtgctggaggtcgcccggcgg
ctgcccgtgctgcgcgagcgggtggggcgggacctgaccggccgggggctgaaccgggac
cgggtgctggccacggtcacccggctgctcgacatgggcacgttccgcgtcggcagcgac
cagtacgccgtcggcgacgacgccaccttcggcgtggccacgctgcgccccgagcacgcg
cgcagccggggcggctgcgtggtcttcgcgttccccgccaagggcggcgtcgaacaggtg
cggcgcatcgaggacccgcagctgtgccgggtgctggccaacctgcgccgccgccggcgc
gccgccgaccggctgttcggctactgggacggccggggctggcgggacgtgcgcagcgac
gaggtcaacgactacctgcgcgacgccagcggcggcgagatgaccgcgaaggacttccgc
acctggcatgccaccgtgctggcggccaccgagctggcgggccacgtgccggcccggtcc
gtgacggcccgccgccgggcggtggcggcggtgatgcggcaggtcgcggagctgctgggc
aacacggcgaccgtggcccgcacctcgtacgtggacccccgggtggtggacctgttccac
gacggggtggtcgccccggtcgtgccggggaccccccgcgcggaggcggagcggcgggtg
ctggagctgctggcggacgcctga
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