Micromonospora carbonacea: HXZ27_11570
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Entry
HXZ27_11570 CDS
T06722
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mcab
Micromonospora carbonacea
Pathway
mcab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HXZ27_11570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcab03019
]
HXZ27_11570
03400 DNA repair and recombination proteins [BR:
mcab03400
]
HXZ27_11570
Enzymes [BR:
mcab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HXZ27_11570
Messenger RNA biogenesis [BR:
mcab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HXZ27_11570
DNA repair and recombination proteins [BR:
mcab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HXZ27_11570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
HRDC
PcrA_UvrD_tudor
HEM4
Motif
Other DBs
NCBI-ProteinID:
QLD24766
UniProt:
A0A7H8XI77
LinkDB
All DBs
Position
complement(2809941..2811572)
Genome browser
AA seq
543 aa
AA seq
DB search
MKLSTHSMTLRRAARSLFGWKALRPNQLAAMRAVMKRRDALVVLPTGAGKSAIYQIPASL
IPGPTVVISPLLALQQDQIAALNERRRPELRAVRISSDETPAQQAEAIDEIRAGRAEFLF
ITPEQLANPDRMAEVRSLRPALVAIDEAHCISAWGHDFRPDYLALGHLIEGIGRPPVVAL
TATASPPVRDDIVARLRLRDAEVVVSGLDRPNLFLEVAHCPTEDYRWRRLLALLREDGRP
GIIYVPTRRAAEELAARLTDAGFPAEFYHGGMPAGARGELHEAFLADRVPIMVATSAFGM
GIDKPNIAWVVHMALPDSPDSYFQEIGRAGRDGEPARVLLLWQAEDVGLQRFFTGGLPDA
TELRDLAALLRRKPASKKELREATGLGPRKLGQYLALLEQVGAAEPRSRQRIGAPRYSPT
PVEAGDAARAEAERQQTVTRSRTDMMRAFAETTGCRGQALLAYFGEQMTRVCGHCDNCLA
GTSVADDGASGPFPVHSKVRHPEWGPGMVLSYEEDRMTVLFEEVGYKTLSVRVVSEQGLL
TLD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtccacgcactcgatgacgttgcgccgcgcggcgcggagcctcttcggctgg
aaagcgctgcggcccaaccagctcgccgccatgcgcgcggtgatgaagcgacgcgacgcc
ctggtggtgctgcccaccggtgccggcaagtcggcgatctaccagatcccggccagcctg
atccccggcccgaccgtggtgatctcccccctgctcgccctccagcaggaccagatcgcg
gccctcaacgagcgccgccgccccgagctgcgggcggtgcggatcagctcggacgagacg
cccgcccagcaggcggaggcgatcgacgagatccgcgcgggccgggccgagttcctgttc
atcacgccggagcagttggccaaccccgaccggatggccgaggtcaggtcgctcaggccg
gcgctcgtggcgatcgacgaggcgcactgcatctcggcctgggggcacgacttccgcccc
gactacctggcgctggggcacctcatcgagggcatcggccggccccccgtggtggccctg
accgccaccgcctccccgccggtacgcgacgacatcgtcgcccggctgcggctgcgcgac
gccgaggtggtcgtctccgggctggaccggccgaacctgttcctggaggtcgcgcactgc
cccaccgaggactaccggtggcggcggctgctcgccctgctgcgcgaggacggccgcccc
gggatcatctacgtgccgacccggcgggcggccgaggagctggccgcccggctcaccgac
gccggcttcccggccgagttctaccacggcgggatgcccgccggggcgcgcggcgagctg
cacgaggcgttcctcgccgaccgagtgcccatcatggtggccacctcggcgttcggcatg
ggcatcgacaagccgaacatcgcctgggtggtgcacatggcgctgccggactcgccggac
agctacttccaggagatcggccgggccgggcgcgacggggagccggcccgggtgctgctg
ctgtggcaggccgaggacgtcggcctgcaacgcttcttcaccggcggcctgccggacgcc
accgagctgcgcgacctggcggccctgctgcggcgcaagccggccagcaagaaggagctg
cgggaggcgaccggcctggggccgcgcaagctgggccagtatctcgccctgctggagcag
gtcggcgccgccgagccccggtcgcggcagcgcatcggcgcgccccggtactcgccgacg
ccggtcgaggccggcgacgcggcgcgggccgaggcggagcgccagcagaccgtcacccgg
tcgcggacggacatgatgcgggccttcgcggagacgaccggctgccgggggcaggcgctg
ctggcgtacttcggtgagcagatgacgcgggtctgcgggcactgcgacaactgcctcgcc
ggcaccagcgtcgccgacgacggcgcgagcgggccgttcccggtgcacagcaaggtgcgc
caccccgagtgggggcccggcatggtgctcagctacgaggaggaccggatgacggtgctc
ttcgaggaggtcggttacaagacgctgtcggtgcgcgtggtgtccgaacagggcctgttg
accctcgactag
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