Micromonospora carbonacea: HXZ27_14405
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Entry
HXZ27_14405 CDS
T06722
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mcab
Micromonospora carbonacea
Pathway
mcab00040
Pentose and glucuronate interconversions
mcab01100
Metabolic pathways
mcab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HXZ27_14405
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HXZ27_14405
Enzymes [BR:
mcab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HXZ27_14405
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QLD25255
UniProt:
A0A7H8XK87
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Position
complement(3484213..3485565)
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AA seq
450 aa
AA seq
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MRHRFSGAALVALSLLVTPGAAAAAPADAAGPVPRPVERFARQTLPPGDGWAADGVGTTG
GSAAAADQVHLVRTRAELVDALGGDNATNRANATPKLIVVDGVVDGFEAADGSLLGCADL
ADPEYSQAAYLAAYDPAGWGMVPPTGPLEAARVRSVANQTKQTQINVGPNTTIVGLRGAT
LTGLTLMIDTADNVIVRNLTFDDARDCFPAWSPTDGATGNWNSQYDQVSVRRSEHVWVDH
NTFTDGDNPDSAQPVHFGRPYQVHDGSLDVTHTASLVTASYNRFVGRDKLMLIGSSNTVG
PDVGRLKVTLHHNMFDRVLQRLPRVRFGQVDVYNNWYRLSGEGFSYAVGVGVQSAAYVEN
NHFTLGAGIAAGDLLYDWGGTAVTTRGNWVRADGDRARPVDLVAAYNAAHDPDLGGDAGW
TPTLRHGQVLPAPLVPLVVGALAGANRLPL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaccgcttttccggggcggccctggtcgccctgtccctgctggtcacaccgggc
gcggcggcggccgcccccgccgacgccgccggcccggtgccccggcccgtcgaacgcttc
gcccgccagacgctgccgcccggcgacggctgggcggccgacggcgtcggcaccaccggc
ggctcggccgccgccgccgaccaggtccacctcgtgcgcacccgcgccgagctggtcgac
gccctcggcggcgacaacgccaccaaccgcgccaacgccacccccaagctgatcgtcgtc
gacggcgtggtcgacggcttcgaggccgccgacggcagcctgctcggctgcgccgacctg
gccgacccggagtactcgcaggcggcctacctggccgcgtacgacccggccggctggggc
atggtgccgccgaccgggccgctggaggccgcgcgggtgcgctcggtggccaaccagacg
aagcagacccagatcaacgtcggcccgaacaccaccatcgtggggctgcgcggggcgacg
ctgaccgggctgaccctgatgatcgacaccgcggacaacgtgatcgtgcggaacctgacc
ttcgacgacgcccgggactgcttcccggcctggtcgccgaccgacggcgcgaccggcaac
tggaactcccagtacgaccaggtctcggtgcgccgcagcgagcacgtctgggtcgaccac
aacacgttcaccgacggcgacaaccccgacagcgcgcagccggtgcacttcggccgcccc
taccaggtgcacgacgggtcgctggacgtcacccacaccgccagcctggtcaccgcctcg
tacaaccggttcgtcggccgggacaagctgatgctgatcggctcgtcgaacaccgtcggc
ccggacgtcggccggctcaaggtgaccctgcaccacaacatgttcgaccgcgtgctccag
cggctgccgcgcgtgcggttcggccaggtcgacgtctacaacaactggtaccggctctcg
ggcgagggcttctcctacgccgtcggcgtcggggtgcagtccgcggcgtacgtggagaac
aaccacttcacgctgggcgcgggcatcgccgccggggacctgctctacgactggggcggc
accgccgtcaccacccggggcaactgggtgcgcgccgacggcgaccgggcccgcccggtc
gacctggtggccgcgtacaacgcggcccacgaccccgacctgggcggcgacgccggctgg
acgccgaccctgcggcacggccaggtgctgcccgcgccgctggtcccgctcgtggtcggc
gcgctcgccggcgcgaaccgcctgccgctgtga
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