Micromonospora carbonacea: HXZ27_20825
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Entry
HXZ27_20825 CDS
T06722
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mcab
Micromonospora carbonacea
Pathway
mcab03030
DNA replication
mcab03430
Mismatch repair
mcab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HXZ27_20825 (dnaE)
03430 Mismatch repair
HXZ27_20825 (dnaE)
03440 Homologous recombination
HXZ27_20825 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcab03032
]
HXZ27_20825 (dnaE)
03400 DNA repair and recombination proteins [BR:
mcab03400
]
HXZ27_20825 (dnaE)
Enzymes [BR:
mcab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HXZ27_20825 (dnaE)
DNA replication proteins [BR:
mcab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HXZ27_20825 (dnaE)
DNA repair and recombination proteins [BR:
mcab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HXZ27_20825 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
B1
Motif
Other DBs
NCBI-ProteinID:
QLD26350
UniProt:
A0A7H8XNR6
LinkDB
All DBs
Position
complement(5041800..5045336)
Genome browser
AA seq
1178 aa
AA seq
DB search
MGDSFAHLHVHTEYSMLDGAARLKDLFAEANRLGMPAVAMTDHGNMHGANDFYKQAMAAG
ITPILGVEAYVAPESRYHKARVKWGRPEQKSDDVSGNGAITHMTMWAANKTGLHNLFTLN
SRASMEGHYVKWPRMDMELIAEHAEGIMATTGCPSGAVQTRLRLGQFDEAIKVASAYQDI
FGKDNYFLELMDHGLSIERRVRDGLTEIGKKLGIPPVVTNDSHYTHEAQAEAHDVLLCVQ
TGSNIADPNRFRFEGGGYFIKSADQMRAVDSSDLWLQGCRNTLLVAEKVDPAGMFEFHNL
MPRFPIPDGETEESWFRKETFRGLARRFPGGVPEGHVVQAEYELGVIIQMGFPSYFLVVA
DFIQWAKSQGIAVGPGRGSAAGSLVAYALGITDLDPIPHGLIFERFLNPERVSMPDVDID
FDERRRGEVIKYVTDKWGEDKVAQIATFGTIKAKAAIKDSARVLGYPYAVGDRITKAMPP
AVMGKDIPLSGIFDPKHPRYAEAGEIRGLYESDPDVKKVIDTAKGIEGLIRQTGVHAAGV
IMSAEPIIEHIPLMRRDSDGVIITQFDYPTCESLGLLKMDFLGLRNLTIIDDAVKNIQLN
HGKDLDLLGLDLDDKAAYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLALYR
PGPMGVDSHTNYALRKNGLQEITPIHPELEEPLREILAPTHGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFVPFRDGCRERGYSDEAIQAVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKMALYLSECRRMGIQVLPPDVNTSA
GPFTPVGKDIRFGLAAIRNVGANVVTSIMRCRQEKGEYADFYDFLAKVDAVVCNKKTIES
LIKAGAFDVMQHSRKGLLAVHADAIDAYADVKRKEAVGQYDLFGAGFGDAETAGGNTTVM
PTIGEAEWDKRDKLAFEREMLGLYVSDHPLFGLEHVLGAAADCTIAALSEEGTVPDGAVV
TLAGILSGVQRRVTKQGRAWASATLEDLAGGVEALFFPNTYEVIGQYIAEDAIVVVKGRV
DRRDDTPRIMAMDMQLPDVTSNPGSKPVTLTIPVHRCTPPLVERLKETLVLHPGDTEVHV
KLLNGGKTTTLRLGPFRVAATTALMGDLKSVLGPANVS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattcgttcgcgcatctgcacgtgcacaccgagtactcgatgctcgacggtgcg
gcccggctgaaggacctcttcgccgaggccaaccggctcggcatgccggcggtcgcgatg
accgaccacggcaacatgcacggcgcgaacgacttctacaagcaggccatggccgccggg
atcaccccgatcctgggcgtcgaggcgtacgtggcgccggagtcgcgctaccacaaggcg
cgggtgaagtggggccggccggagcagaagagcgacgacgtctccggtaacggcgcgatc
acccacatgacgatgtgggcggcgaacaagaccgggctgcacaacctgttcaccctcaac
tcgcgcgcctccatggagggccactacgtcaagtggccccggatggacatggagctgatc
gccgagcacgccgaggggatcatggccaccaccgggtgcccctcgggcgcggtgcagacc
cggctgcggctgggccagttcgacgaggcgatcaaggtcgcctccgcgtaccaggacatc
ttcggcaaggacaactacttcctggagctgatggaccacggcctctccatcgagcgccgg
gtccgcgacgggctcaccgagatcggcaagaagctcggcatcccgccggtggtgaccaac
gactcgcactacacgcacgaggcacaggccgaggcgcacgacgtcctgctgtgcgtgcag
accggcagcaacatcgccgaccccaaccggttccgcttcgagggcggcggctacttcatc
aagtccgccgaccagatgcgcgccgtcgactcctccgacctgtggctccagggctgccgc
aacacgctgctggtggcggagaaggtcgacccggcggggatgttcgagttccacaacctg
atgccgcggttcccgatccccgacggggagacggaggagtcgtggttccgcaaggagacg
ttcaggggcctggcccggcggttcccgggcggggtccccgagggccacgtggtgcaggcg
gagtacgagctgggcgtcatcatccagatgggcttcccgtcgtacttcctcgtggtcgcc
gacttcatccagtgggccaagagccagggcatcgcggtgggcccgggccgtggctcggcc
gccggctccctggtggcgtacgcgttggggatcacggacctggacccgatcccgcacggg
ctgatcttcgagcggttcctcaaccccgagcgggtctcgatgccggatgtcgacatcgac
ttcgacgagcgtcggcgcggtgaggtcatcaagtacgtcaccgacaagtggggcgaggac
aaggtcgcgcagatcgccaccttcggcacgatcaaggcgaaggccgcgatcaaggactcg
gcgcgggtgctgggctacccgtacgcggtgggggaccggatcaccaaggcgatgccgccg
gcggtgatgggcaaggacatcccgctgtcgggcatcttcgacccgaagcacccgcgctac
gcggaggcgggggagatccggggcctgtacgagtcggacccggacgtgaagaaggtcatc
gacacggcgaagggcatcgaggggctgatccggcagaccggcgtgcacgccgccggggtg
atcatgtcggcggagccgatcatcgagcacatcccgctgatgcggcgcgactccgacggg
gtgatcatcacccagttcgactacccgacgtgcgagtcgctcgggctgttgaagatggac
ttcctcggcctgcgcaacctcacgatcatcgacgacgcggttaagaacatccagctcaac
cacggcaaggacctggacctgctgggcctggacctggacgacaaggccgcctacgagctg
ctggcgcgcggcgacacgctcggggtgttccagctcgacggcgggccgatgcggtcgctg
ctgcggctgatgaagccggacaacttcgaggacatctccgccgtcctcgcgctgtaccgg
ccgggcccgatgggcgtggactcgcacaccaactacgcgctgcgcaagaacggcctccag
gagatcacgccgatccacccggagctggaggagccgctgcgggagatcctcgcccccacc
cacggcctgatcgtctaccaggagcaggtgcagcgggccgcgcagatcctcgccggctac
accctgggccaggccgacctgctgcggcgggcgatgggcaagaagaagaaggagatcctc
gacaaggagttcgtgccgttccgggacggctgccgcgagcgcggctactccgacgaggcg
atccaggccgtgtgggacgtcctcgtgccgttcgccgggtacgcgttcaacaaggcgcac
tcggcggcgtacgggctggtgtcgtactggacggcgtacctgaaggcgcactacccggcc
gagtacatggcggcgctgctgacctccgtcggcgacgacaaggacaagatggcgctgtac
ctgtcggagtgccggcggatgggcatccaggtcctcccgcccgacgtgaacacctccgcc
gggccgttcaccccggtcggcaaggacatccggttcggcctcgcggccatccgcaacgtc
ggggcgaacgtggtgacctcgatcatgcggtgccgccaggagaagggcgagtacgccgac
ttctacgacttcctggccaaggtcgacgcggtggtctgcaacaagaagaccatcgaatcg
ctgatcaaggccggcgcgttcgacgtcatgcagcacagccgcaaggggctgctcgccgtg
cacgccgacgccatcgacgcgtacgccgacgtcaagcgcaaggaggccgtcggccagtac
gacctgttcggcgccggcttcggcgacgccgagaccgccggcggcaacaccaccgtcatg
ccgaccatcggcgaggccgagtgggacaagcgcgacaagctcgccttcgaacgcgagatg
ctcgggctctacgtctccgaccaccccctgttcggcctcgaacacgtcctcggcgcggcg
gccgactgcaccatcgccgccctctccgaggagggcaccgtccccgacggcgcggtggtc
accctcgccggcatcctctccggcgtgcagcgccgcgtcaccaagcagggccgggcgtgg
gcgtcggccaccctggaggacctggccggcggcgtggaggccctgttcttccccaacacc
tacgaggtgatcggccagtacatcgccgaggacgccatcgtcgtggtcaagggccgggtc
gaccgccgcgacgacaccccccgcatcatggcgatggacatgcaactgcccgacgtcacc
agcaacccgggcagcaagcccgtcaccctcaccatccccgtgcaccgctgcaccccgccc
ctggtcgaacgcctcaaggagaccctcgtcctgcaccccggcgacaccgaggtccacgtc
aagctcctcaacggcggcaagaccaccaccctgcgcctcggccccttccgggtcgccgcc
accaccgccctgatgggtgacctcaagagcgtcctcggcccggccaacgtgagctga
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