Micromonospora carbonacea: HXZ27_25925
Help
Entry
HXZ27_25925 CDS
T06722
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mcab
Micromonospora carbonacea
Pathway
mcab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HXZ27_25925 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcab03021
]
HXZ27_25925 (rho)
03019 Messenger RNA biogenesis [BR:
mcab03019
]
HXZ27_25925 (rho)
Transcription machinery [BR:
mcab03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HXZ27_25925 (rho)
Messenger RNA biogenesis [BR:
mcab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HXZ27_25925 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
NACHT
VWA_2
Motif
Other DBs
NCBI-ProteinID:
QLD27224
UniProt:
A0A7H8XR44
LinkDB
All DBs
Position
complement(6227479..6229569)
Genome browser
AA seq
696 aa
AA seq
DB search
MSDTTDVTSDVSNVAGDATAAAPTRRRRSGTGLSAMLLPELQSLAASLGISGTARMRKGE
LISAISERQGGAAAGTPRPRAEATAAAAPAREEVRAEVTQAPSGTERAPAEPTAAPAEGR
TRTRRSRAVAAAESRPAEAETRPAEPRAEEPPAAATVVAEPAERVEGRRERGSRDQAERG
ERTERAERAERGDRAERAERGDRADRTDRTDRGGDRNERGDRSERAERDRNDRGERAERG
DRNERADRNERTDRGDRNDRNDRGQRAERDNGGDDDDEGGGRRGRRSRFRDRRRGRGERG
EGDGAAGGGSGGREPQVSEDDVLVPVAGIIDVLDNYAFVRTTGYLAGPNDVYVSMSQIKK
YGLRRGDAITGAVRAARDGEQRRDKYNPLVRLDTINGMEPEEARRRPEFYKLTPLYPQER
LRLETEPHILTTRVIDLVMPLGKGQRALIVSPPKAGKTMVLQAIANAITHNNPECHLMVV
LVDERPEEVTDMQRSVKGEVIAATFDRPPQDHTTVAELAIERAKRLVELGHDVVVLLDSV
TRLGRSYNLAAPASGRIMSGGIDSTALYPPKRFLGAARNIENGGSLTILATALVETGSMA
DTVIFEEFKGTGNAELKLDRKIADKRTFPAVDVSASGTRKEEILLAPEELAIIHKLRKVL
HSLDSQAALDLLLDRLKQSRTNIEFLMQIAKSTPGE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaccaccgacgtgacgtcggatgtttccaacgtcgctggcgatgccaccgcc
gctgcccccacccgtcgtcggcgtagcggcaccgggctgtcggcgatgctgctgccggag
ctccagagcctggccgcgtcgctcggcatctccggcacggctcgcatgcgcaagggcgag
ctgatcagcgcgatctccgagcggcagggcggcgccgccgccgggacccctcgtccacgg
gccgaggccacggccgccgccgctccggcccgcgaggaggtgcgcgccgaggtcacccag
gccccgtcgggcaccgagcgggccccggccgagccgaccgccgccccggcggagggccgg
acccggacccggcgcagccgggccgtcgcggcggccgagtcccggcccgccgaggccgag
acccggccggcggagccccgggccgaggagccgccggccgccgccaccgttgtcgccgag
cccgccgagcgggtcgaggggcgtcgggagcggggcagccgggaccaggccgagcgcggc
gagcggaccgagcgggccgagcgggctgagcgcggtgaccgggccgagcgggccgagcgc
ggtgaccgtgccgaccgcaccgaccgcaccgaccgcggcggggaccgcaacgagcggggc
gaccggtccgagcgggccgagcgtgaccgcaacgaccgtggcgagcgggccgagcgtggc
gaccgcaacgagcgggccgaccgcaacgagcggaccgaccgtggcgaccgcaacgaccgc
aacgaccggggtcagcgcgccgagcgggacaacggcggcgacgacgacgacgagggcggc
ggccggcggggccggcgcagccgcttccgcgaccgccgccggggccggggcgagcgcggc
gaaggcgacggcgccgccggtggcggtagcggcgggcgcgagccgcaggtgagcgaggac
gacgtgctcgtcccggtcgccggcatcatcgacgtgctcgacaactacgccttcgtccgg
accaccggctacctggccggcccgaacgacgtctacgtctcgatgtcccagatcaagaag
tacggcctgcgccggggcgacgcgatcaccggcgcggtgcgggcggcccgggacggcgag
cagcggcgggacaagtacaacccgctggtgcggctcgacacgatcaacgggatggagccg
gaggaggcccggcggcggccggagttctacaagctcaccccgctctacccgcaggagcgg
ctgcggctggagacggagccgcacatcctgacgacgcgggtgatcgacctggtcatgccg
ctcggcaagggccagcgggcgctgatcgtctcgccgccgaaggcgggcaagacgatggtg
ctccaggcgatcgcgaacgccatcacgcacaacaacccggagtgccacctgatggtggtg
ctggtggacgagcggcccgaagaggtcaccgacatgcagcggtcggtgaagggcgaggtc
atcgcggccacgttcgaccgcccgccgcaggaccacacgacggtggcggagctggcgatc
gagcgggcgaagcgactggtcgagctggggcacgacgtggtcgtgctgctcgactcggtg
acccggctcggtcggtcgtacaacctggcggcgccggcctccggccggatcatgtcgggt
ggtatcgactccaccgcgctctacccgccgaagcgcttcctgggtgcggcccgcaacatc
gagaacggcggctcgctgaccatcctcgccaccgcgctggtggagaccggttccatggcg
gacacggtcatcttcgaggagttcaagggcaccggcaacgcggagctgaagctcgaccgg
aagatcgccgacaagcgcaccttcccggccgtggacgtcagcgcctcgggcacgcgcaag
gaggagatcctgctcgcgccggaggagctggccatcatccacaagctccgcaaggtgctg
cactcgctggactcgcaggcggcgctcgacctcctgctggaccggctcaagcagtcccgc
accaacatcgagttcctgatgcagatcgcgaagtccacaccgggcgagtga
DBGET
integrated database retrieval system
