Mucisphaera calidilacus: Pan265_05650
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Entry
Pan265_05650 CDS
T07838
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mcad
Mucisphaera calidilacus
Pathway
mcad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pan265_05650 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcad03019
]
Pan265_05650 (rhlE)
Enzymes [BR:
mcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pan265_05650 (rhlE)
Messenger RNA biogenesis [BR:
mcad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pan265_05650 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
CMS1
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QDU70730
UniProt:
A0A518BUS1
LinkDB
All DBs
Position
complement(716649..718064)
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AA seq
471 aa
AA seq
DB search
MDFRDLPLAGPVLRAVADKGYTTATPIQAAAIPPVLDGRDVLGCAQTGTGKTAAFALPII
NHFAELKSNPKHRNPTCLVLCPTRELAVQIAESFQGYSKHTRLRGALIFGGVNQNPQVKK
LRAGVDVLVATPGRLLDLMNQGHARLESIDTLVLDEADRMLDMGFMPDIRRITAEIPRKR
QTLLFSATMPGPIRELADDLLRNPVHIEITPPATTVERIEQNVYFIEKPHKTRLLAHLLS
TMSIERAIVFTRTKYGADKVARQLRKANVESDAIHGDKSQNARQRALDYFKKGRINVLVA
TDIASRGIDVDGISHVFNYDLTHEPESYVHRIGRTARAGATGHAISFCDPSERKNLRAIE
RATRQTIEPIEDAGFAPPASEASGARAQADKPTGEAQAEKPGKPGAKSAHKSKPRKQRSA
AQRKAAAARKSERPQAGKKASSRRQRSGAPGKGAMKRKPRVKAAASGSAAG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggattttcgtgacctccccctcgcaggacctgttctgcgcgccgtggccgacaagggc
tacaccaccgcgaccccgattcaggccgcagcgatcccgccggtgcttgacgggcgtgac
gtactcggctgtgcccagaccgggacgggcaagacggctgcgttcgcgctgccgatcatc
aatcatttcgccgagctcaagagcaacccgaagcaccggaacccgacctgcctggttctc
tgcccgacgcgtgagttggcggtgcagatcgccgagagctttcagggctacagcaagcac
acgcggctgcgcggcgcgctgatcttcggcggggtgaatcagaacccgcaggtcaagaag
ctgcgtgccggcgtggacgtgctggtggcgacacccggccggctgctggacctgatgaat
cagggccacgcacgcctggagagcatcgacacgctggtgctcgacgaggccgaccggatg
ctcgacatgggcttcatgccggacatccgtcggatcacggcggagatcccgcgcaagcgc
cagacgctcctgttctcggccaccatgcccgggccgatccgcgaactggccgacgacctg
ctgcgcaacccggtgcacatcgagatcacgccgccggcgaccacggtggagcggatcgag
cagaacgtctacttcatcgagaaaccgcacaagacgcgcctgctcgcccacctgctgagc
acaatgtcgatcgaacgcgcgatcgtcttcacgcgcacgaagtacggggccgacaaggtc
gctcgccagctgcgcaaggccaacgtggagtcggacgcgatccatggcgacaagagccag
aacgcacgccagcgtgcgctcgactacttcaagaaggggcggatcaacgtgctggtcgcg
accgacatcgcgtcgcgaggcatcgacgtggacgggatctcgcacgttttcaactacgac
ctgacgcacgagccggagagctacgtgcaccggatcgggcgcacggcacgggccggcgcg
acgggacacgcgatctcgttctgcgaccctagtgaacgcaagaacctccgggccatcgag
cgtgcgacccggcagacgatcgagccgatcgaggacgcgggctttgccccccctgcttcg
gaagcgtcgggtgctcgggctcaggccgacaagccgaccggcgaggcacaggccgagaaa
cccggcaagcccggtgcgaagtccgcacacaagagcaagccgcgcaagcagcgttcggcg
gcccagcgaaaagcggcggcggcacgcaagtccgagcgtcctcaggccgggaagaaagct
tcctcacggcgtcaacgatcgggggctccgggcaagggtgcgatgaagcggaaaccccgg
gtcaaggctgctgcgagtggctccgcggctggttga
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