Mucisphaera calidilacus: Pan265_07770
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Entry
Pan265_07770 CDS
T07838
Symbol
rpoA_1
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mcad
Mucisphaera calidilacus
Pathway
mcad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pan265_07770 (rpoA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcad03021
]
Pan265_07770 (rpoA_1)
03400 DNA repair and recombination proteins [BR:
mcad03400
]
Pan265_07770 (rpoA_1)
Enzymes [BR:
mcad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pan265_07770 (rpoA_1)
Transcription machinery [BR:
mcad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pan265_07770 (rpoA_1)
DNA repair and recombination proteins [BR:
mcad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pan265_07770 (rpoA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_1
TPR_7
TPR_CcmH_CycH
TPR_12
TPR_10
ARM_TT21_C
TPR_5
DUF16
ANAPC3
MIT
TPR-S
ARM_TT21_4th
Motif
Other DBs
NCBI-ProteinID:
QDU70933
UniProt:
A0A518BVB7
LinkDB
All DBs
Position
complement(979919..980851)
Genome browser
AA seq
310 aa
AA seq
DB search
MTETAAYAGDSSEVRDTETAKKYFDQGWQAEMSGDRMAAISSYEAAYTADPQDANVCFRL
AYNLDLLGEEDEALHLYEEAVRQERPSLQALINLAVLYEDRSHFARAERCIRQVLNTEPN
HPRARLFIKDIMASKGMLIDDEQEKRLEKHNAMLDTPVTDFELSVRTRNALRKMSIRTLG
DLLRVTEPELRSFKNFGDASLEEIKTMLAQKGLKLGQAVEQHQESVKEQVYEQLREQGGN
DEMLSKSVNELNLSVRARKALALLNVQTIGDLAMKTEAELMGVKNFGMTSLVEIKEKLTE
NGLGLRSLDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaccgcggcgtacgctggcgactccagcgaggttcgtgataccgagacggcg
aagaagtacttcgatcaggggtggcaggcagaaatgtccggcgaccgcatggcggcgatc
tcctcctacgaggcggcctacacggccgatccgcaggacgcgaacgtctgcttccgcctc
gcttacaacctcgacctgctcggcgaagaagacgaggccctgcacctctacgaagaagcg
gtccgccaggaacgaccttcgctccaggcactgatcaacctcgcggtcctctacgaagac
cgcagccacttcgcgcgggccgagcgctgcatccgccaggtgctcaacaccgagccgaat
cacccgcgtgcacgcctgttcatcaaggacatcatggcgtcgaagggcatgctcatcgat
gacgagcaggagaagcgactcgagaagcacaacgcgatgctcgacacgccggtcaccgac
ttcgagctgtcggtgcggaccagaaacgccctgcgaaagatgagcatccgtacgctcggc
gacctgctgcgtgtgacggagccggagcttcggtccttcaagaacttcggcgacgcgtcg
ctcgaagaaatcaagaccatgctggctcagaagggcctcaaactcggtcaggccgtagaa
cagcaccaggagtcggtcaaggagcaggtctacgagcagctgcgcgagcagggtggcaac
gacgagatgctgagcaagtcggtcaacgagttgaacctgtcggtacgtgcccgcaaggcg
ctggcgctgctcaacgtgcagaccatcggcgacctcgcgatgaagaccgaagccgaactg
atgggcgtgaagaacttcggcatgacctcgctggtcgagatcaaggaaaagctcaccgag
aacggcctgggcctgcgttcccttgatgcctga
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