Mucisphaera calidilacus: Pan265_19180
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Entry
Pan265_19180 CDS
T07838
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mcad
Mucisphaera calidilacus
Pathway
mcad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pan265_19180 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcad03021
]
Pan265_19180 (rpoC)
03400 DNA repair and recombination proteins [BR:
mcad03400
]
Pan265_19180 (rpoC)
Enzymes [BR:
mcad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pan265_19180 (rpoC)
Transcription machinery [BR:
mcad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pan265_19180 (rpoC)
DNA repair and recombination proteins [BR:
mcad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pan265_19180 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QDU72056
UniProt:
A0A518BYK9
LinkDB
All DBs
Position
complement(2331123..2335589)
Genome browser
AA seq
1488 aa
AA seq
DB search
MAEQLFDRVNDFNRVKINLASPNDIRSWSFGEVKKPETINYRTYRPEKDGLFCERIFGPE
RDYECACGKYKGTKFKGIICDRCGVKVTHSRVRRKRMGHINLAAPIVHIWFFKAIPSHLG
NLLGMKTSDLEKVIYFQDYVVVDPGDTPLKQQQILTEDDYRHAISEYGRGFTAMMGAEAV
KELLARLELAAVAAELREELAATKSKQKIKDLSKRLRIVELIRHSENDPAWMVMDVVPVI
PPDLRPLVLLDSGNFATSDLNDLYRRIINRNNRLKKLMDLNAPEVIIRNEKRMLQQSVDA
LFDNGRCRRPVLGSSNRPLKSLTDMIKGKQGRFRENLLGKRVDYSARSVIVVGPELKLHQ
CGLPKKIALELFQPFIIRRLKEHGLVDTIKSAKKMLERRDPEVWDVLEEVIDQHPVLLNR
APTLHRMGIQAFEPVLVEGNAIRIHPLVCSGFNADFDGDQMAVHLPLSVEAQAEAHILML
SPHNIFSPANGSPIISAGQDIVYGVYYMTLMPQPLPDDVVKELVTRSGELSEEMVEQMRQ
VPEFRNESEAFMAYQLGKIKIHDPIVARIDPKRYQGVVLSEKSDVEPFSETGRVVTTVGR
LIFNEILAEAMPFYNCPLGKKGCSRVIDDTYASNGRPATIDLLDHMKRLGFQAATNAGLS
LAITDLRIPERKQDILGATQKKVDRVEKAYEGGALTERERYNQLVDLWTHCREEITKQVV
EEMKRDRRAADGRRVSIDDPAGMIYLNPAWVEVESGARGKIGQLQQLAGMRGLMAKPSGE
IIETPIKANAREGLSVLEYFSSTHGARKGLADTALKTADSGYLTRKLCDVAQNVFVTQDD
CQTKQGITKKALYKGEEIDVPLRDQIIGRTARETIRNPITDELIVAENEVFTDEIARKIE
ALGIDSVNIRSPLSCESREGICAKCYGIDMSTSKLVEQGLAIGIIAAESIGEPGTQLTMR
TFHTGGVATTSAADTSFVATQGGTIEIRDANEVTSITEDGDEVLVTLKRNGELLINDDKG
RELEKFKLQYGCFIHVKPGEKVKKGTVLVTWDPHRTAILAEKGGKVRYEDIIVGETVRPE
QQSGAKGAGAAGLVVIEHKGELHPRIVIEDSDGKILDFHYLPAKARIDVVEGQEVEAGHM
LARQPREATGTADIVGGLPRVTEIFEARKPKDAAVMAEISGTVELRNDKRRGKMTVIVRS
DSGLEVDHHVPQDRHLLVHTNDFVEAGDQLIEGPLVPQDILAIKGEEALFIYLINEVQNV
YRAQGVPINDKHIEIIVNQMLRKVRVENPGDTNLLPNEVLDKWRFREANEAVASMGKIKE
PGDSMLPIGAKVTKAELKEINAQLETDGQETAKASKCRPASGKTLLLGITKASLQSESFL
SGASFQETTKVLTDAALAGRTDSLQGLKENVLLGHLIPVGTGFKDYVNLEVVKLAEPPDS
EMLSREEELEAAAAMAEAAGAESPEDIGTTVGESRLVAQLLGEDGNKN
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacagctcttcgatcgcgtcaacgacttcaaccgggtcaagatcaacctcgcc
agccccaacgacatccgttcgtggtcgttcggcgaggtcaagaagcccgagacgatcaac
taccgaacctaccgccccgagaaggacggcctgttctgcgagcgcatctttggtcccgaa
cgcgactacgagtgcgcctgcggcaagtacaagggcacgaagttcaagggcatcatctgc
gaccgctgcggcgtgaaggtcacccactctcgcgtccgccgcaagcgcatgggccacatc
aacctcgcggcacccatcgtccacatctggttcttcaaggcgatcccctcgcacctgggc
aacctgctggggatgaagacctccgacctcgagaaggtcatctacttccaggactacgtc
gtcgtcgaccccggcgataccccgctcaaacagcagcagatcctcaccgaggacgattac
cgccacgcgatctccgagtacggccgcggcttcactgccatgatgggtgccgaggccgtc
aaggaactgcttgcgcgtcttgaactcgctgccgtggccgctgaactgcgtgaagaactc
gctgctaccaagtccaagcagaagatcaaggatctctccaagcggctccgcattgtcgag
ctgatccgccactccgagaacgaccctgcatggatggtcatggacgtcgtcccggtcatc
ccgcccgacctgcggcctctggtcctgctcgactccggcaacttcgcgacctccgacctc
aacgacctctaccgccggatcatcaaccgcaacaaccgcctcaagaagctgatggacctc
aacgcgcccgaggtcattatccgcaacgagaagcgtatgctccagcagtcggtcgacgcg
ttgttcgacaacggccgctgccgacgccccgtcctcggcagttccaaccgaccgctcaag
tcgctcaccgacatgatcaagggcaagcagggccgcttccgcgagaacctgctcggcaag
cgcgtcgactactccgcgcgttcggtcatcgtcgtcggtcccgagctcaagctccaccag
tgcggcctgcccaagaagatcgcgctcgagctgttccagcccttcatcatccgtcgcctc
aaggagcacggactcgtcgacaccatcaagtcggcgaagaagatgctcgagcgacgcgac
cccgaggtctgggacgttcttgaggaagtcatcgaccagcaccccgtgctgctcaaccgt
gccccgactcttcaccgcatgggcatccaggccttcgagcccgtcctcgtcgagggcaac
gccatccgtatccacccgctcgtctgctccggcttcaacgccgacttcgacggcgaccag
atggccgtccacctgccgctctcggttgaggcgcaggccgaagctcacatcctgatgctc
tcgccccacaacattttctcgcccgccaacggcagcccgatcatctcggccggtcaggac
atcgtctacggcgtctactacatgacgctgatgcctcagccgctgcccgacgacgtcgtc
aaggaactcgtcacgcgatccggcgagctctccgaagagatggtcgagcagatgcgtcag
gtccccgagttccgcaacgagtcggaggccttcatggcctaccagctcggcaagatcaag
atccacgacccgatcgttgcccgcatcgatccgaagcgttaccagggcgtcgtcctcagc
gagaagagtgacgtcgaaccgttctccgagaccggacgtgtcgtcaccaccgtcggccga
ctcatcttcaatgagatcctggccgaggccatgcccttctacaactgcccgctcggcaaa
aaaggctgctcacgcgtcatcgacgacacctacgcctccaacggccggcccgcgacgatc
gatcttctcgaccacatgaagcggctcggtttccaggccgccaccaacgccggactctct
ctggccatcacggacctccgcatcccggagcgcaagcaggacatcctcggcgcgacccag
aagaaggtcgaccgtgtcgagaaggcttacgagggcggtgcccttaccgagcgagagcgc
tacaaccagctcgtcgacctctggacacactgccgtgaggagatcaccaagcaggtggtc
gaagagatgaaacgcgaccgccgcgccgccgacggccgacgcgtctctattgatgaccct
gccggcatgatctacctcaaccccgcctgggttgaggtcgagtcgggtgctcgcggcaag
atcggccagctccagcagctcgccggcatgcgtggtctcatggccaagccctcgggtgag
atcatcgagactcccatcaaggccaacgcacgcgagggtctttccgtcctcgagtacttc
tcctccacccacggcgcgcgtaagggtctggccgataccgccctcaagaccgccgactcg
ggctacctgacccgtaagctctgcgatgttgcccagaacgtcttcgtcacgcaggacgac
tgccagaccaagcagggcatcaccaagaaggccctatataagggtgaagagatcgacgtg
ccgctgcgtgatcagatcatcggtcggacggcacgcgagaccatccgcaaccccatcacc
gacgagctcatcgttgccgagaacgaggttttcaccgacgagatcgcccgcaagatcgag
gcgctcggcatcgactcggtcaacatccgctcgcctctgtcctgcgagtcgcgtgagggc
atctgcgcgaagtgctacggcatcgacatgtcgaccagcaagctcgtcgagcagggtctg
gccatcggcatcatcgccgccgagtccatcggcgagcccggcacgcagctgacgatgcgt
accttccacaccggcggcgtcgccaccacctcggcggccgacacctcgttcgtggccacg
cagggcggcaccatcgagatccgcgacgccaacgaggtgaccagcatcaccgaggacggc
gacgaggtgctcgtcacgctgaagcgcaacggcgagctgctcatcaacgacgacaaggga
cgcgagctggagaagttcaagctccagtacggctgcttcattcacgtgaagcccggcgag
aaggtcaagaagggcacggtccttgtcacctgggaccctcaccgaaccgccatcctcgcc
gagaagggcggcaaggtccgctacgaggacatcatcgtcggcgagacggttcgccccgag
cagcagtccggggccaagggcgccggtgccgcgggcctcgtggtcatcgagcacaagggc
gaactccatccccgaatcgtcatcgaggacagcgacggcaagatcctcgacttccactac
ctgcccgccaaggcgcgtatcgacgtcgtcgagggccaggaagttgaagccggacacatg
ctcgcacggcagccgcgcgaggctaccggcacggccgacatcgtcggcggtctgccccgc
gtcaccgagatcttcgaggcccgtaagcccaaggatgccgctgtcatggcggagatctcc
ggcaccgtcgagctgcgcaacgacaagcggcgcggcaagatgaccgtgatcgtccgatcc
gactccggactcgaagtcgatcaccacgtcccgcaggaccgccacctgctcgtccacacc
aacgacttcgtcgaggcgggcgaccagctcatcgagggcccgcttgtcccgcaggacatc
ctggccatcaagggcgaagaggcgctcttcatctacctcatcaacgaggtccagaacgtc
taccgcgcccagggcgtgcccatcaacgacaagcacatcgagatcatcgtcaaccagatg
ctccgcaaggtgcgcgtcgagaaccccggcgacaccaacctcctgcccaacgaagtcctc
gacaagtggcgcttccgcgaggccaacgaggccgtcgccagcatgggcaagatcaaggag
cccggcgactccatgctccccatcggggccaaggtcaccaaggccgagctcaaggagatc
aacgcccagctcgagaccgacgggcaggaaaccgccaaggcatccaagtgccgacccgcc
tccggcaagactctgctcctgggcatcaccaaggcctccctccagagcgagtccttcctc
tccggtgcctcctttcaggagaccaccaaggtcctcaccgacgcggctctcgccggtcgc
accgactcccttcagggactcaaggaaaacgtcctcctcggacacctcatccccgtcggt
accggcttcaaggactacgtcaatctcgaggtcgtcaagctcgccgagcctccggactcg
gaaatgctctcccgcgaggaagagctcgaggcagcggccgccatggccgaggccgccggc
gctgagtcccccgaggacatcggcaccaccgtcggcgagtcacggcttgtcgcccagctc
ctcggcgaagacggcaacaagaactga
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