Mucisphaera calidilacus: Pan265_19190
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Entry
Pan265_19190 CDS
T07838
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mcad
Mucisphaera calidilacus
Pathway
mcad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pan265_19190 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcad03021
]
Pan265_19190 (rpoB)
03400 DNA repair and recombination proteins [BR:
mcad03400
]
Pan265_19190 (rpoB)
Enzymes [BR:
mcad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pan265_19190 (rpoB)
Transcription machinery [BR:
mcad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pan265_19190 (rpoB)
DNA repair and recombination proteins [BR:
mcad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pan265_19190 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
AHD
Motif
Other DBs
NCBI-ProteinID:
QDU72057
UniProt:
A0A518BYK2
LinkDB
All DBs
Position
complement(2335694..2339491)
Genome browser
AA seq
1265 aa
AA seq
DB search
MLQMTSVRNFSKRGDALPVPHLVDVQLVAYERFIQLEKPFDQRDPSIGLESLLREVFPIE
SYDGNMHLEYLYYKLDEPRYTPQECKQLRLTYGMPFRIGVRLVRKDVPEIPEEEIYLGEI
PVLLGGGEYIINGAERVIVNQLHRSPGVDFSIASAEADRPLHSARIIPERGSWIELEVSK
KDVLQMRIDQSTKIPATTFIRAIDEDYSATETLLRLFYDVNEVKVTDLRPEHYAAAPIVD
TDTGEELVPIGAQIGENAERIMGSPLKTVLAIPNPGDMLILNTLADEKQVDLEGVKVSEH
EAALLALYARLRPGNPPQVDKARQLFAEKFFDENRYRLGKVGRFRINRKFDLEVPETEMA
LRAEDFLKVIGYMLDLRSNRNKAHVDDIDHLGNRRLRTLDELAVEELRKGFLKLRRTVQE
RMSVKDPDELSKIADLINSKSISSAVEHFFGRGELSQVVDQTNPLSQLTHERRLSALGPG
GLNRKRAGFEVRDVHISHYGRVCPIETPEGTNIGLICSLGIYSRIDEYGFLLTPYRPVKD
GEIEDEIVYLRADEEMKLTLGPTDAIDKEGKLQKGSVLARVDGELTSIGSNSLDYVDISP
KQIVGVSAALIPFLEHDDANRALMGSNMQRQAVPLIKVQPPCVGTGMEKEVPKYSGMVVR
ARNAGTVTYVDAQRIVVDNADEYVLRKYSGLNERTCQNQRPTVSLGERVEKDQIIADGAA
TSNGELALGKNVLVAFNTFDGYNFEDAIVISERLVTEDTFTSIHIEEYDVEIRETKLGRE
EFTRDIPNVSEKMLSKLDEHGIIRIGAYVKPGDILVGKVSPKSKSELTPEEKLLHAIFGR
AGEDVKNDSLEVPAGTEGIVIGAKRFSRRMHLNEEQKKQLRREMREYEAEMDARAADLFR
QMVDQVNEVTGTAMVDPSTRQKVGASDITEVVLEQINDFDTKWIKGSKEIRDEAITVYDA
FWPRITAIEKEKQRRLAHMKRGDELPSGVLEMVKIYLATKRTLSVGDKMAGRHGNKGVIS
RIVPVEDMPFLEDGTPVDVLLNPLGVGKRMNVGQILETHLGWACAVLGFQAVTPVFDGAS
EDEIEAAIQEANDHVDQRAADFEQNKVVPNDRELLAKMPANYKIQLHDGRTGEPFDQRTT
VGYMYLLKLHHLVDDKIHARATGPYSLITQQPLGGKARTGGQRFGEMEVWALEAYGAAYI
LQELLTVKSDDVEGRTKIYESMVKGTNTLEAGMPVAFDVLCNEVKGLGLNITLEKNDADG
IGAIL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagatgacctccgtgcgcaatttctcgaagcgtggcgacgcgcttcccgtccct
cacctcgtcgatgttcagctcgtagcctatgaacgcttcatccagttggagaagccgttc
gatcagcgcgatccgagcatcggcctcgagtccctcctccgcgaggtgttcccgatcgag
tcttacgacgggaacatgcatctcgagtatctctactacaagctcgacgagccccggtac
acgccgcaggagtgcaagcagctccggctgacctacggcatgccgttccgcatcggcgtt
cgcctggttcgcaaggacgttcccgagatccccgaggaggaaatctacctcggcgagatc
cccgtgcttcttggtggtggcgagtacatcatcaacggtgccgaacgtgtcatcgtgaat
cagctccaccgctcgccgggcgtcgacttctcgatcgcttcggcggaggccgaccggccg
ctgcactcggcgcgcatcattcccgagcgcggctcgtggatcgaactcgaggtgtccaag
aaggacgtcctccagatgcgtattgatcagtccaccaagatcccggcgacgacgttcatc
cgtgcgatcgacgaggactactccgccaccgagaccctcctgcgtctgttctacgacgtc
aacgaggtcaaggtgactgatcttcgtcccgagcactacgccgccgcgccgatcgtcgat
accgacaccggcgaggaactcgtgcccatcggcgcccagatcggtgagaacgccgagcgc
atcatgggctcgcccctcaagaccgtgctcgccatccccaaccccggcgacatgctcatc
ctcaacaccctcgccgacgagaaacaggtcgacctcgagggcgtcaaggtctccgagcac
gaggcggcgctgctcgcgctgtacgcgcggctccgacccggcaacccgccgcaggtcgac
aaggctcgccagctcttcgccgagaagttcttcgacgagaaccgctaccgcctcggcaag
gtcggccgcttccgcatcaaccgcaagtttgacctcgaggttcccgagaccgagatggca
ctccgcgccgaagacttcctgaaggtcatcggctacatgctcgacctccgcagcaaccgt
aataaggcccacgtggacgacatcgaccacctgggcaaccgtcgcctgcgcaccctcgac
gaactcgcggtcgaagaactccgcaagggtttcctcaagcttcggcgcaccgtccaggag
cgtatgagcgtcaaggatcccgacgagctctccaagatcgctgacctgatcaactccaag
tcgatcagctccgccgtcgagcacttcttcgggcgaggtgagctgtcgcaggttgtcgac
cagaccaacccgctctcccagctgacccacgagcgtcgactctcggcactcggccccggc
ggcctgaaccgcaagcgtgccggcttcgaggtccgcgacgtccacatcagccactacggc
cgcgtgtgtcccatcgagacgcccgaaggcaccaacatcggtcttatctgctcgctgggc
atctactcgcgcatcgacgagtacggcttcctgctcacgccttaccgcccggtcaaggac
ggtgagatcgaggacgagatcgtctacctccgcgccgacgaggagatgaagctcactctc
ggcccgaccgacgccatcgacaaggagggcaagcttcagaagggttcggtcctcgcacgc
gtcgacggcgagctcacctccatcggctcgaacagccttgattacgtcgacatcagcccc
aagcagatcgttggcgtttctgcggcgctgattcccttcctcgagcacgacgacgccaac
cgcgccctcatgggatccaacatgcagcggcaggccgtccccctgatcaaggtccagccg
ccttgtgtcggcacgggcatggaaaaggaagtgcccaagtactcgggtatggttgtccgc
gcacgcaacgccggcaccgtcacctacgtcgatgcccagcggatcgtcgtggacaacgcc
gacgagtacgtcctccgcaagtactcagggctcaatgaacgaacctgtcagaaccagcgg
cctacggtcagtctcggcgaacgcgtcgagaaggaccagatcatcgccgatggtgctgcc
acctccaacggcgagctcgccctcggcaagaacgtcctcgtcgccttcaacaccttcgac
ggctacaacttcgaggacgccatcgtcatttccgagcgtctcgtcaccgaggacaccttc
acctcgatccacatcgaggagtatgatgtcgagatccgcgagaccaaactcggtcgtgag
gaattcacccgcgacattcccaacgtctccgagaagatgctctccaagctcgacgagcac
ggcatcatccgcatcggtgcctacgtcaagccgggcgatatcctcgtcggcaaggtctcg
cccaagagcaagtccgaactgacgcccgaagagaaactcctgcacgccattttcggccgt
gccggcgaagacgtgaagaacgactcgctggaggttcccgccggcaccgagggcatcgtc
atcggtgccaaacggttcagccgtcgcatgcacctcaacgaggagcagaagaagcaactc
cgccgcgagatgcgcgagtacgaggccgagatggacgcccgcgccgccgacctcttccgg
cagatggttgatcaggtcaacgaggtcaccggcaccgcgatggtcgacccctcgacccgc
cagaaggtcggtgcctccgacatcaccgaggtcgtcctcgagcagatcaacgacttcgac
acgaagtggatcaagggatccaaggaaatccgcgacgaggccattaccgtctacgacgcc
ttctggccgcggattaccgcgatcgagaaggagaagcagcgacgcctcgcccacatgaag
cgtggcgacgagctcccctcgggcgtgctcgaaatggtcaagatctacctcgccaccaag
cggacgctctccgtcggcgacaagatggccggacgccacggcaacaagggcgtcatctcg
cgcatcgtccctgttgaggacatgcccttcctcgaggacggcacccccgtcgacgtcctg
ctcaacccgctcggcgtcggcaagcggatgaacgttggccagatcctcgaaacccacctc
ggctgggcctgcgccgttctcggcttccaggccgtgacccccgtcttcgacggcgcttcc
gaggacgagatcgaggccgcgatccaggaagctaacgaccacgtggaccagcgtgccgca
gacttcgagcagaacaaggtcgtccccaacgaccgcgagctgctggccaagatgcccgcc
aactacaagatccagctccacgacggacgcaccggcgagccgttcgatcagcggaccacc
gttggctacatgtacctgctcaagctccaccacctcgttgacgacaagatccacgcacgc
gccactggcccctactcgctcatcacccagcagccgctgggcggcaaggcacgcaccggc
ggccagcgcttcggcgagatggaggtctgggccctcgaagcctacggcgccgcctacatc
cttcaggaattgctcaccgtcaagagcgatgacgtcgaaggacgcaccaagatctacgag
tcgatggtcaagggcaccaacacgctcgaggccggcatgcccgtcgcgttcgacgtgctc
tgcaacgaggtcaagggccttggcctcaacatcacgctcgagaagaacgacgccgacggc
atcggcgccatcctgtaa
DBGET
integrated database retrieval system
