Mucisphaera calidilacus: Pan265_21180
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Entry
Pan265_21180 CDS
T07838
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mcad
Mucisphaera calidilacus
Pathway
mcad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pan265_21180 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcad03019
]
Pan265_21180 (cshA)
03009 Ribosome biogenesis [BR:
mcad03009
]
Pan265_21180 (cshA)
Enzymes [BR:
mcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pan265_21180 (cshA)
Messenger RNA biogenesis [BR:
mcad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pan265_21180 (cshA)
Ribosome biogenesis [BR:
mcad03009
]
Prokaryotic type
rRNA helicases
Pan265_21180 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
SMC_N
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QDU72254
UniProt:
A0A518BZ63
LinkDB
All DBs
Position
2554018..2555349
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AA seq
443 aa
AA seq
DB search
MSDLFDESVRFADLGLNDRILAALDRKGFEHPTLIQAQLIPPILNGKDVMGQAKTGSGKT
AAFALPILHLADPDIPMQALVLAPTRELAVQVAGEIEKLAEDTDIKVSCIIGGESMRKQK
KSMEAGGHIIVGTPGRVMDLQNRRELSFDRIRFAVLDEVDRMLDIGFRDDIRQILKTCPT
DRQTIFVSATISGEIERLGRQFMKEDAEKVETVGSSLTVSMVDQKYLSVEPWDKRTMLLY
LIRKEEPETTVVFCKTKATVHKVTQYLRDKGVSVREIHGDLHQTKRTRVMNALRQKQVDV
LIASDLAARGLDIDHITDVVNYDLPEDPEVYVHRIGRTARAGRRGRAWSFVTPEEGQRLT
EIEKLSGALIEAVFYEDFEPGPIPKAVREERAKSESPRKVVERGPVDPTTLSEQELQSMF
PGGVIPKGKPRTGMGGRHRGRRR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatctgttcgacgaatcggtacgctttgccgacctcggtctcaatgaccgcatc
ctcgctgcgctggaccgcaagggcttcgagcacccgaccctgatccaagcccagctcatc
ccccccatcctcaacggcaaggacgtcatggggcaggccaagaccggcagcggcaagacc
gccgcctttgccctgcccatcctccacctcgccgaccccgacatccccatgcaggcgctc
gtcctcgcgcccacccgagagctcgccgtccaggtcgccggcgagatagaaaaactcgcc
gaggacaccgacatcaaggtctcctgcatcatcggcggcgagtcgatgcgcaagcagaag
aagtccatggaggccggcggtcacatcatcgttggcacccccggccgcgtcatggacctc
cagaaccgccgggaactcagcttcgaccggatccgcttcgccgtcctcgacgaggtcgac
cgcatgctcgacatcggcttccgcgacgacatccgccagatcctcaagacctgcccgacc
gaccgccagacgatcttcgtttccgccaccatcagcggcgagatcgaacgcctgggccgg
cagttcatgaaagaggatgcggagaaggtcgaaacagttggcagctcgctgaccgtgagc
atggtcgaccagaagtacctgtcggtcgagccgtgggacaagcggacgatgctgctctac
ctgatccgcaaggaggagccggaaacgaccgtcgtcttctgcaagacgaaggcgaccgtg
cacaaggtcacgcaataccttcgtgacaaaggggttagtgttcgcgagatccatggcgac
ctgcaccagaccaagcgcacccgggtgatgaacgcgttgcgtcagaagcaggtggatgtg
ctgatcgcgtcggaccttgctgcgcgggggctggacatcgaccacatcacggacgtggtg
aactacgacctgccggaggacccggaggtgtacgtgcaccggatcggccggacggcccgg
gcgggccgtcgcgggcgggcgtggagtttcgttacacccgaggaaggacaacgacttaca
gaaattgagaagctgtccggagcgttgattgaggcggtgttttacgaggatttcgagccg
ggtccgatcccgaaggcggttcgtgaggagcgtgcgaagtcggagtcgcctcggaaggtg
gtggagcgtgggcctgtggatcctacgacgttgtcggagcaggagttgcagtcgatgttc
ccgggcggggtgatcccgaagggcaagccgaggacgggcatgggcggtcgtcaccgcggc
cgacggagatag
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