Mucisphaera calidilacus: Pan265_24950
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Entry
Pan265_24950 CDS
T07838
Name
(GenBank) PD-(D/E)XK nuclease superfamily protein
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
mcad
Mucisphaera calidilacus
Brite
KEGG Orthology (KO) [BR:
mcad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
mcad02048
]
Pan265_24950
Enzymes [BR:
mcad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
Pan265_24950
Prokaryotic defense system [BR:
mcad02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
Pan265_24950
Subtype I-B factors
Pan265_24950
Subtype I-C factors
Pan265_24950
Subtype I-D factors
Pan265_24950
Type II CRISPR-Cas system
Subtype II-B factors
Pan265_24950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QDU72623
UniProt:
A0A518C081
LinkDB
All DBs
Position
complement(2988350..2989027)
Genome browser
AA seq
225 aa
AA seq
DB search
MAGYADEDLIPISALQHYLFCPRQCALIHVDGLWAENRLTSEGKVLHERSDTPGHRTRAV
EDHGVRCVRAMPLVHRRLGLTGRADVVEFPLDSEGCPAGPPRPVEHKRGNPKRLDHDRVQ
LAAQAICLEEMLGVEVPKGELFYHAVRRRETVTIDAHLRKVVERTVDEVRGYLETNTVPA
AKQEPKCRNCSLLHLCMPAATGLSRRPGQYLIRSLRISLDTEGSP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggccggctacgccgacgaagacctgatcccgatctcggcgttgcagcactaccttttc
tgcccgcgtcagtgcgcactgatccacgtcgacgggctatgggccgagaaccggctcacg
agcgaaggcaaggtgcttcacgagcgatcggatacgcccggccaccgcacccgggccgtc
gaggatcacggggtgcgttgcgtccgcgcaatgcccctggtccaccggcggctcgggctg
acgggccgtgctgatgtcgtcgagttcccgttggactcggaaggctgtcccgccgggccg
ccgcggcctgtggagcacaaacgcggtaacccgaaacgtctcgatcacgaccgcgttcaa
ctcgccgctcaggccatctgcctcgaagagatgctcggagtggaggttccgaagggggaa
ctcttttatcacgctgtccgccgacgcgagacagtcaccatcgacgcccatctacgaaag
gtagtcgagcgaaccgtcgacgaggtccgcggctaccttgaaacgaacaccgtccccgcc
gcgaaacaagagccgaagtgcaggaactgttcactcctccacctctgcatgcccgccgcc
acgggcctcagccgccgaccggggcagtacctgatccgctcgctccgcatcagtctcgat
acggagggctcgccgtga
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integrated database retrieval system
