Mytilus californianus (California mussel): 127698635
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Entry
127698635 CDS
T08804
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf04382
Cornified envelope formation
mcaf04512
ECM-receptor interaction
mcaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127698635
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127698635
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127698635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcaf04147
]
127698635
00536 Glycosaminoglycan binding proteins [BR:
mcaf00536
]
127698635
Exosome [BR:
mcaf04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
127698635
Glycosaminoglycan binding proteins [BR:
mcaf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127698635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
127698635
NCBI-ProteinID:
XP_052058153
LinkDB
All DBs
Position
Unknown
AA seq
1766 aa
AA seq
DB search
MNEWLLKIACLVSLCSYHAVLAQRDPNDPECQGGNCVFHNGCKCVGEKGSRGSPGPIGPP
GPQGIQGFPGMEGLQGTKGMKGEHGPEGPDGPKGNRGKMGMPGFPGMNGIPGIPGPVGPR
GPPGLDGCNGTQGEPGNPGTSGFPGPVGPPGFPGSKGGKGEPARNGVGIKGTKGEPGVDG
FPGQVGPPGRDGGPGPKGNTGLNGGRGFDGVPGQKGEKGSDGISVRGPPGVAGEIGDPGP
PGPPGNQKGSLFEGPKGSYIGPKGDHGRKGDEGEKGRTGPDGFKGESGRDGMKGMPGMFG
EKGVPGIAGPRGKQGLPGLPGLPGLKGDRGMDGLPGLNGLAGEKGGLGFEGPKGDLGPRG
LPGPAGGKGGNGPSGPKGDRGPPGPRGFPGNDGFPGLPGPQGETGPAGGPGVPGPPGPQG
KDGIKGDKGGPGSSGLPGIDGLPGLNGLSGEKGEPGFTGEPGRSIPGPEGPPGFSGRDGV
PGIKGERGRDGVPGESGNSTRGRPGLPGQKGEKGLKGYGGLPGRDGEPGIPGFKGDRGGS
CSDCLPGLKGERGSNGVDGIPGRNGEPGLPGPQGYKGERGLDGLPGFQGQPGEPGIPGQP
GLDGLRGFKGEAAFIPPDYQVNCEKGGQGLDGLPGPKGNQGRPGTQGPPGSSGFPGLKGD
KGDGGRPGLDGIPGSNGLPGQPGQKGDAGIGIPGLPGIRGEPGANGLPGTSGFIGLKGEP
GEKTPVNIADIKGNKGDKGAPGMTGSTGRDGLPGMRGDKGMNGIPGINGRPGESGPRGED
GLPGLPGPRGLPGSRGDKGTPGLPGGPGLDGLKGESGRNGFPGMKGDNGLPGLPGAVLEG
AKGDRGLDGLSGERGPAGRPGQDGVPGLDGLPGMKGEPGPSGLSGIPGQPGGKGESGRNG
IPGEPGRTGADGLPGLPGDLAAKGEPGLPGVRGIDGEPGIPGEAGSSGRPGLPGLDGPQG
PPGLPGQDGLPGAKGDAGVFGFPGEPGRDGLPGLPGLKGGKGDRGLNGVPGTAGLPGLSG
GKGDRGLDGLPGFEGRPGVDGLPGPKGESGLPGQRGISGEPGRDGLPGLDGSRGDNGLPG
VGIPGEAGISGEPGREGLPGGRGPFGSKGDEGVPGFPGMKGERGPRGDAGRPGGPGQDGL
PGMKGESGLDGLPGIAGPKGDSGFPGGEGRPGIKGESGPPGLNGSPGLDGPRGEPGPSGL
PGRDGEPGLPGMKGESGLPGFDGLPGPKGNPGNNGPPGVSGEKGNPGFPGPDGQPGLPGP
KGERGFNGRDGGKGEPGRTSEGSKGEPGLPGRSGIDGLPGMKGDVGFAGRDGFPGAKGES
GEPGIGGIGQKGTRGLDGLPGSSGLRGESGVDGLPGVNGRKGESGDRGLNGLPGPQGPAG
LDGRKGEPGIPGGFGAKGQKGQSGLDGLPGNPGPKGESGRNGFDGQPGENGLNGLPGEKG
NTGLPGVINYAQIPPGPKGEPGIPGLRGFPGQDGLKGEVGLRGPPGFPGIKGGRGLDGLS
GMKGELGQRGFPGVPGQDGLPGARGLEGEPGRPGLPGNTPPSGFLLVRHSQSQEIPTCPE
RLTKIWDGYSLLYIEGNERSQHQDLGWAGSCLRRFSTMPFLFCNTNNVCNYANRNDKSYW
LATNAPLPMMPVTDNDISRYISRCVVCDAPANVIAVHSQTLQIPECPIGWSGMWIGYSFA
MHTGAGPSGGGQSLSSPGSCLEDFRATPFIECNGDGGNCHFYANKYSFWLTTIDQNSQFS
SPIPSTLKAGNLRTRVSRCQVCVKNV
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatggcttttgaagattgcctgtctggtatcattatgtagttatcacgccgtg
ttagctcaacgtgaccctaatgacccagaatgtcagggtggtaactgtgtattccataat
ggatgtaaatgtgttggagaaaaaggatctaggggatcacctggtcctattggtccacct
ggaccccaaggtattcagggatttcctggtatggaaggtctgcagggaactaaaggaatg
aaaggtgaacatggacctgaaggacctgatggcccaaagggtaacaggggtaagatgggt
atgcctggatttcctggaatgaatggtattcctggtattcctggccctgttggaccaaga
ggcccacctggtttggatggatgcaatggaactcagggagaacctggtaatccaggaact
tctggatttcctggacctgtaggacctcctggtttccctggatccaaaggaggaaaggga
gaacctgctagaaatggtgttggtatcaagggaactaagggagaacctggtgtagatgga
tttccaggacaagtgggaccacctggtagagatggaggacctggtcctaaaggaaataca
ggattaaatggaggaagagggtttgatggtgttcctggtcaaaagggagaaaaaggaagt
gatggcataagtgtaagaggtccccctggagtagcaggagagattggagatcctggtcca
cctggtccaccaggaaaccaaaaaggtagtctttttgaagggccaaagggatcatatatt
ggacctaaaggagatcatggaaggaagggagacgagggagaaaaaggacgaactggacca
gatggatttaaaggagaatctggaagagatggaatgaaaggtatgcctggtatgtttggt
gagaaaggtgttcctggaatagctggacctaggggaaaacaaggattgccagggttacca
ggactgcctggattgaaaggtgaccgtggaatggatggacttcctggactaaatggactt
gccggagaaaagggtggcctagggtttgaaggtcctaagggagatttaggaccaaggggt
cttcctggcccagcaggaggaaaaggtggtaatggaccgtctggaccaaaaggagataga
ggacctccaggtccaagaggtttccctggaaatgatggatttcctggtcttcctggaccc
caaggagaaactggaccagctggaggacctggagtaccaggaccaccgggaccacaagga
aaagatgggataaagggagacaaaggaggaccaggttcatcaggtctacctggaatagat
ggtttacctggattgaatggattatcaggtgaaaaaggagaacctggattcacaggtgaa
ccaggcaggtccattcctggtcctgaaggccctccaggattctcaggaagggatggtgtc
ccaggtataaagggtgaaagaggaagggatggtgtgcctggggagtctggtaattcaaca
agaggcaggcctgggttacctggacagaaaggtgaaaaggggttaaaaggttatggtgga
ttgcctggacgagatggtgaacctggtattcctggatttaaaggtgacagaggaggatct
tgcagtgattgtctccctggactgaaaggagagcgtggttcaaatggtgttgatggtatc
ccaggaagaaatggcgaacctggactccctggtcctcaaggttacaaaggagaaagagga
cttgatggactgccaggatttcagggacaacctggagagcctggtattcccggacaacca
ggtttggatggattaagaggttttaagggagaagctgcctttattcctcctgattatcaa
gtaaattgtgaaaagggaggtcaaggattggatggtttacctggacctaaaggtaaccaa
ggaagaccaggaacccaaggaccacctggtagttctggattcccaggactgaagggtgat
aagggagatggaggacgtccaggactagatggtattcctggtagcaatggactccctggt
caaccaggacaaaagggagatgctggaattggtatcccaggtcttcccggaataagagga
gaacctggagctaatggacttcctggaacatcaggtttcataggattgaagggagaacca
ggtgagaaaactccagttaatatagcagacatcaagggaaataaaggtgacaaaggtgca
cctggtatgacaggtagcacaggaagagatggattacctggaatgagaggtgacaaaggt
atgaatggaataccaggtataaacggcagaccaggggaatctggtccccgtggtgaagat
ggacttcccggacttcccggaccaagaggacttcctggatctagaggggataaaggaacc
ccaggactccctggaggaccaggacttgatggactaaaaggagaatcaggacgtaatggc
ttcccaggaatgaaaggtgacaatggtttgcctggtttaccaggtgccgtgttagaagga
gccaagggagacagagggttggatggattatctggagaaagaggaccagcaggtcgtcct
ggacaagatggtgtacctggattggatggattacctggtatgaagggagaacctggacca
tcaggattatctggaattccaggacagcctggtggtaagggagaatctggaagaaatgga
atacctggagaacctggacgtactggtgcagatggcttacctggattacctggtgacctt
gctgctaaaggagagcctggtttaccaggtgttagaggtattgatggggaaccaggcatc
ccaggagaggctggatcaagtggcagaccaggattaccaggattagatgggccacagggt
cctccaggattaccagggcaagatggactaccaggagcaaaaggtgacgctggtgtattt
ggattcccaggagaacctggacgtgatggactgcctggattacctggtttgaaaggtggt
aaaggtgaccgaggactcaatggtgtaccaggaacagcaggtctccctggattgtcaggt
ggtaagggagatagaggtttagatggactaccaggatttgaaggtcgcccaggagtagat
ggattgcctggaccaaagggagaatcaggattgccaggacaacgtggaatcagtggggaa
ccaggcagagatggcttaccaggtttagatggaagcagaggagataatggacttccagga
gttggtatcccaggtgaggctggtatctctggagaaccaggcagagaaggtctacctgga
ggcaggggaccatttggatctaaaggagatgaaggtgtgccagggttccctggtatgaag
ggagaaaggggtccaagaggagacgcaggtcgtcctggagggccaggtcaagatggacta
cctggaatgaaaggtgaatcaggtttggatggcttaccaggtattgcgggaccaaaagga
gattccggattccctggaggggaaggtagaccaggtattaaaggagaaagtggaccacca
ggacttaatggatccccaggtttagatggacccagaggagagcctggaccatctggttta
cctggaagagatggtgagcctggacttcctggaatgaaaggagaatcaggattgcctgga
tttgatggtctacctggacctaaaggtaaccctggaaacaatggaccgccaggtgtatca
ggagagaaaggaaatcctggattcccaggacctgatggacaaccgggattacctggacca
aaaggagaaagaggtttcaatggaagagatggaggtaagggagagccaggaagaacatca
gagggaagtaaaggggaaccaggtctaccaggccgttcagggatagatggtctgccagga
atgaagggagatgttggttttgctggtagggatggattcccaggtgctaagggtgaatca
ggagagcctggaattggaggaattggacagaaaggaacacgtggattggatggattgcca
ggtagttctggtctccgtggagaatctggtgttgatggattacctggagtgaatggtcgt
aaaggagaatcaggagatagaggtctaaatggtttacctggtcctcagggtcccgctgga
ttggatggtcgtaaaggtgaaccaggtattcctggtggctttggagctaaaggtcaaaaa
ggacagtcaggtttagatggattgcctggaaatcctggacctaaaggagaaagtggacga
aatggatttgatggacaacccggagaaaatggattaaatggcttacctggtgagaaagga
aacacaggtctaccaggtgttataaattatgcacaaatacctccaggtccaaaaggagaa
ccaggaatacctggattgagaggcttccctggtcaagatggactaaaaggagaagttgga
ctcagaggaccacctggatttcctggtattaaaggaggtcgtggattggatggtttatct
ggtatgaaaggtgaactaggacagcgtgggttccctggtgttcctggtcaggatggactt
ccaggtgcacgtggcttagagggagaacctggacgtccaggattgccaggaaatactcca
ccctctggtttcctgttagtacgtcacagtcagagtcaagagattccaacctgtccagaa
agacttaccaaaatatgggatggatacagtttattgtacattgaaggaaatgaaagatct
cagcatcaagatttaggttgggctggttcctgtctccggagattcagcacaatgccattc
cttttctgtaacacaaacaatgtttgtaactatgccaacagaaacgataaatcctattgg
ttggctacaaatgctcctttacccatgatgcctgtgacagataacgatatctctcgttac
atcagtagatgtgtggtatgtgatgccccagctaatgtaattgctgtacacagtcaaaca
ttacagattccagagtgtcccattggctggtcaggaatgtggattggatacagttttgct
atgcacactggagcaggacctagcggaggaggacagtcattgtccagccctggcagttgt
ctagaagatttcagagctactccatttatagaatgtaatggtgatggtggaaattgtcac
ttttatgcaaacaaatacagtttctggctcacaaccatagatcaaaattcacagttttct
agtcctataccatcaactcttaaagctggaaatctccgtacacgtgtcagtagatgtcaa
gtttgtgtcaaaaatgtttaa
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integrated database retrieval system
