Mytilus californianus (California mussel): 127698796
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Entry
127698796 CDS
T08804
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcaf03041
]
127698796
Spliceosome [BR:
mcaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127698796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_15
LAMB4
DUF1672
Motif
Other DBs
NCBI-GeneID:
127698796
NCBI-ProteinID:
XP_052058433
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MSHDPNKELPAYTKMSSGDADSTVKTESNPDEAVKTVEHVEDNTTLGKYWKAVKENVSDF
TGWTYLLQYVEQENKLDDAREAYDAFFQHYAYCYGYWKKQADMEKRHGFTDKAIAVYETG
VKAIPVCVELWLHYISFYITYFPDSIEDIRKLYERAIKAAGTDFRSDKLWDSYISWEKDL
PNVTSLHDRVLTIPTQLYRHHYDSFKHHVETHHPKEILSLDDFLKLRKEIVNKTILTGDD
DEHVMDEGPPAFIGPPGLEVPPGMEDTEGGKADTDEAIKLKDRLITTREVMYRKNEEEVS
KRWNFEEAIKRPYFHVKPLERGQLKNWREYLDWEIQNGTHERVVVLFERCMIACALYEDF
WMKYAKYMEDHSLDAVRTVYSRACKIHLPKKPYIHMAWASFEERQGNYDGAYDVLATLEK
SVPGLIMVAMRRISLERRRGNLPTVETFFKDYIENAASPEIASFYSIKYARFLLKIKVDP
DAAREVFKQAIEKDMGNLKLYLQTLDLEYQCTPVDEEKVNILFESLLNCENFSLETKAKM
SQRKLEFLEDFCSDIKKLKDAYDEHQKLMKDLHTERKKRSYDAANYTQSLSEEPPEKKQK
SEPPTNGAGESMSQSAGTEHGSYPYWGSYNNSSYAAGYGQHWTTYGSHYYP
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgacccaaataaagaacttccggcgtacacaaaaatgtcgagcggcgatgca
gactccacggtgaaaacagaatcaaatccagatgaagctgtgaaaactgttgaacatgtt
gaagataatacaactctaggaaaatattggaaagctgtgaaagaaaatgtgtccgatttt
acaggatggacatatttacttcaatatgttgagcaagagaacaaacttgacgatgcccgt
gaagcttatgatgcatttttccaacactacgcatactgttacggctattggaagaaacaa
gccgatatggaaaaacgacatggttttacagataaagctatagctgtgtatgagactgga
gtgaaagccattcctgtttgtgtagaattatggttacattacatatcattttacataact
tattttcctgatagcattgaggatataaggaaattatatgagagggcaatcaaagctgcc
ggtactgacttcagatctgataaactttgggattcatacatttcttgggaaaaagatctt
ccaaatgttacatcattacatgacagagtattaaccattccaacacaattatatagacat
cattatgacagttttaagcaccatgttgaaacacatcatcctaaagaaatcctgtctctt
gatgattttcttaagcttcgaaaggaaatagtgaataagaccatcttgactggagatgat
gatgagcatgtgatggatgaaggtccccctgccttcataggtcctcctgggcttgaagta
ccaccaggaatggaagacacagaagggggaaaggctgatacagatgaagctataaaatta
aaagatagattaatcactacaagggaagttatgtatagaaagaatgaggaagaagtcagt
aagagatggaattttgaagaagcaataaagagaccttatttccatgtgaaaccattagaa
agaggtcagctgaaaaactggagagagtatttagattgggaaatacagaatggaactcat
gagcgagttgttgttttatttgagagatgcatgattgcatgtgctttgtatgaggacttc
tggatgaagtatgctaaatacatggaggaccacagtttggatgctgtcagaacagtatac
agcagagcttgtaaaatccatctaccaaagaaaccatatatacacatggcatgggcatct
tttgaagaaagacaaggaaattatgatggtgcttacgatgtgctggcaactctagagaaa
agtgttcctggactgattatggttgctatgagaagaataagtttagaaagaagacgagga
aatttaccaactgtggaaacatttttcaaagactatattgaaaatgctgcatcaccagag
attgcatctttttattctattaaatatgctcgttttcttttgaagataaaggttgaccca
gatgctgccagagaagtgtttaaacaagctatagaaaaagatatgggaaatcttaagtta
taccttcaaacactggacttggaatatcaatgtactcctgtcgacgaagaaaaagtcaac
atactgtttgaaagtttattgaactgtgaaaacttctcattagaaactaaggcaaaaatg
tcgcaaagaaaattggaatttttagaagatttttgttcagatataaaaaaattaaaagat
gcttatgatgaacaccagaaattgatgaaagatttacatacagagagaaagaaaagaagt
tatgatgctgctaattatacacagagtttgagtgaagagccacctgagaaaaaacagaaa
agtgaacctccaacaaatggtgctggtgagtcaatgtcacagtctgctggtacagaacat
ggtagttacccatactggggatcatataataattcaagctatgctgctgggtatggacaa
cactggacaacatatggttctcattactacccatga
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