Mytilus californianus (California mussel): 127698945
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Entry
127698945 CDS
T08804
Name
(RefSeq) nuclear RNA export factor 1-like isoform X1
KO
K14284
nuclear RNA export factor
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03008
Ribosome biogenesis in eukaryotes
mcaf03013
Nucleocytoplasmic transport
mcaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127698945
03015 mRNA surveillance pathway
127698945
03008 Ribosome biogenesis in eukaryotes
127698945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127698945
03009 Ribosome biogenesis [BR:
mcaf03009
]
127698945
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127698945
mRNA cycle factors
Stress granule specific factors
127698945
Ribosome biogenesis [BR:
mcaf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
127698945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
UBA_8
Motif
Other DBs
NCBI-GeneID:
127698945
NCBI-ProteinID:
XP_052058679
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MSHFKVTTNRDGRRSFGEHDDRWTDNGRGGHGGGQRTFGKRGGRKSYGGFNRGSGYNRGG
RPDRSRGRGRGFNHGPGPRSRFDDEGDVDMGGNSGGPSTSRYTPYGNNRRGDRRKTYGRD
RDTQASSADKYKKMGLPVRGSDNQWYRVLIPFGKKAGKEGLLKLLNDNLDVPFIPVCFHF
EQEKAVFHIQDRQASESLRRLSNRLTMPNGFKMIVIAKPSGPPSVFTLDEEGIEKLKVCM
SSRYDPATKALNLSNLYNDANLSQEKIHLALNKQTVMSQVSDIIGENIPELETLDVSENK
LMGLENMRDLVSKAPNVVRLNIGKNLIRVIEELEKIKGWKLQELILDGNDLCDRFKDRTA
YISAVRKRFPKVIKLDGHDLPPPITFDLESSSSLPPKKGSFFLSPDLQELTVKFLKEYFT
IYDSVDRQSLLPAYQDDALFSLSTAFNPLIEYSQPKLHDYMPESRNLLKMSRDPGKRQKV
LKKGKLGIVSQLCELPKTTHDYNSFVVDVDHASSTLLSFTVLGVFKEDSRSDKPPIRSFS
RHFVTVPSGPGMVIVNDMLTVTNASHEQFQKAFKSQAPTPSSSPVPDEGPSVLFPPPACS
TPFTPEQQQKIQSFCHDSGMNAEWSAKCLQQYNWDYMEAGKVFSELQKQNKIPPEAFLS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagccactttaaagttaccacaaatcgtgatggcagacgttcatttggagaacatgat
gaccgatggacagacaatggcagaggtggtcatggtggtggacaaagaacatttggaaaa
agaggtggaaggaagagctatgggggctttaatagaggaagtggttacaacagaggtgga
agaccagatagatctagaggaagaggtagaggattcaatcatggccctggacccagaagt
agatttgatgatgaaggagatgtagatatgggaggtaactccggtgggccatccacatca
agatatacaccttatggaaacaacagaagaggagacagaagaaaaacttacggaagagac
agagatacacaagcatcaagtgcagataaatataaaaagatgggattgcctgtgagaggt
tcagacaatcagtggtatcgtgtactgatacctttcggaaagaaagcagggaaagaagga
ctattaaaacttctgaatgacaatctggatgtgccatttatcccagtttgttttcatttt
gaacaagagaaagctgtttttcatatacaagacagacaagcatcagaatctctgagaaga
cttagtaatagacttactatgccaaatggttttaaaatgattgtgatagcaaaaccaagt
ggtccaccatctgtatttactttggatgaagagggcatagaaaaactcaaagtgtgtatg
agtagcagatatgatccagctacaaaggctcttaacctcagcaatctctataatgatgca
aatctttctcaagaaaaaattcatctggcattgaacaaacaaactgtcatgtctcaagtt
tctgatatcataggagaaaacataccagagttggaaaccctggatgtgagtgagaacaaa
ttgatgggtctggaaaacatgagagatcttgtgagcaaagctccaaatgtagtcagacta
aacatagggaaaaacttgatcagagtcatagaagaattggagaagatcaaaggctggaaa
ctccaggagctaattctagatggaaatgatttatgtgataggtttaaagatcggacagct
tatattagtgctgtacgcaaaagattcccaaaagtgataaaacttgatggacatgacctc
ccacctccaataacttttgacttggaatcttcatcatcactacctccaaaaaagggcagt
ttctttttaagtccagatttacaggagctaacagtcaagtttttgaaggaatattttaca
atatatgattctgttgacagacagtctttgcttcctgcctatcaagatgatgctttgttc
tcactgtctacagcttttaatccattgattgaatacagtcaaccaaagttacatgattac
atgccagagagtagaaatcttttaaagatgtcaagagacccaggaaaacgtcaaaaagtt
cttaagaaaggaaaacttggaattgtgtcacagctgtgtgaactaccaaaaacaactcac
gattacaactcatttgtggtggatgttgatcatgcctcgtctactcttttgagcttcaca
gttttgggagttttcaaagaagatagtagatcagacaaaccacccataagatcattcagc
agacattttgtaacagtaccaagtgggcctgggatggtgattgtaaatgatatgttgact
gttacaaatgcttcacatgaacagtttcagaaagcctttaagtctcaggcccctacacca
tcctctagtccagttccagatgagggaccatcagtactctttcctccaccagcctgtagc
acaccattcacaccagaacaacaacagaagatccaaagtttttgccatgactcgggcatg
aatgctgaatggtcagcaaaatgtttgcaacagtataattgggattatatggaagctggt
aaggtattctctgaactgcagaaacaaaacaagattcctccagaagcttttctaagttga
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integrated database retrieval system
