KEGG   Mytilus californianus (California mussel): 127700435
Entry
127700435         CDS       T08804                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
mcaf  Mytilus californianus (California mussel)
Pathway
mcaf03020  RNA polymerase
mcaf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mcaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127700435
  09124 Replication and repair
   03420 Nucleotide excision repair
    127700435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcaf03021]
    127700435
   03400 DNA repair and recombination proteins [BR:mcaf03400]
    127700435
Transcription machinery [BR:mcaf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     127700435
DNA repair and recombination proteins [BR:mcaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127700435
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 127700435
NCBI-ProteinID: XP_052059858
LinkDB
Position
Unknown
AA seq 273 aa
MPYANQPTVTLTELTDENLKFTLEDTDLSVANAVRRVCIAEVPTMAIDWVQIESNSTVLF
DEFLSHRIGLIPLTSDEIVDRMQYSRDCTCEEFCPECSVEFTLDMKCNDDQTTHVTSAHL
ISSNPKCVPVTSKRKEEASEYEETDDILIVKLRKGQELKVRAFARKGFAKEHAKWNPTCG
VAFEYDPDNALRHTVYPKPEEWPKSEYTELEEEETQAEPNPLGKANKFFYNVESCGSLRP
ENIMFSTLSVLKKKLSDLQTQLSHEIQSDALAI
NT seq 822 nt   +upstreamnt  +downstreamnt
atgccctacgctaatcaacctactgtaactttaacagaattaacagacgagaatcttaaa
tttacccttgaagatactgatttgagtgttgcaaatgctgttagaagagtatgcatagct
gaagttccaaccatggcaatagattgggtacagatagaatccaattctactgtgttattt
gacgagtttctgtcccacagaattggtttgataccgctgaccagtgacgaaatagtggac
aggatgcagtattctagagattgtacatgtgaagagttttgcccagagtgttcagtagag
ttcacattggatatgaaatgtaacgacgaccagaccacccacgtaactagtgcacatctc
atttccagtaatcctaaatgtgttcctgttacatctaaaagaaaagaagaagcaagcgaa
tatgaagaaacagacgatatcttaatagtaaaattaagaaaagggcaggaattgaaagtt
agagcttttgcaaggaaaggatttgccaaggagcatgctaagtggaacccaacctgtggc
gtagcatttgagtatgatccagataatgcactgagacacacagtctaccccaaaccagaa
gaatggccaaagagtgagtacacagaacttgaagaagaagaaacacaagcagaaccaaat
ccacttggaaaagctaacaaatttttctacaatgttgaatcatgtggttcattgagacct
gaaaatattatgttttcaacgttatctgtgctgaagaaaaaacttagtgatttacaaact
caactcagtcatgaaatacaaagtgatgcactggctatttga

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