Mytilus californianus (California mussel): 127701545
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Entry
127701545 CDS
T08804
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127701545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaf03021
]
127701545
03041 Spliceosome [BR:
mcaf03041
]
127701545
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127701545
Transcription machinery [BR:
mcaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127701545
Spliceosome [BR:
mcaf03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
127701545
Complex B
127701545
Complex C
U2 SnRNP specific factors
127701545
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
127701545
TFTC complex
127701545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
127701545
NCBI-ProteinID:
XP_052061419
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGIAHAIHGNFSGSKLQEIVVSRGKILELLKHDPNTGKCYPLLSVEIFG
TIRALIPFRLTGGSKDYIVVGSDSGRITILEYIPQKNVFERVHQETFGKSGCRRIVPGQY
LAVDPKGRAVMIGAVEKQKLVYILNRDAQARLTISSPLEAHKANTLVYHIVGVDVGFENP
TFACLEIDYEESDSDPSGEVAEKAQQLLTYYELDLGLNHVVRKYSEPLDEHANFLVSVPG
GTDGPSGVLICSENYVTYKNIGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLDTDEDMVTAINLKYFDTVPVAASMCVLKSGFLFVASEFGNSFLYQ
IAQLGDDDDEPRFSSNTPLDEGDTFFFSPRSLKNLVQVDEVDSLSPIMSCQIADLANEDT
PQLYTLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKNVDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHIRSDKRVNEWKTPG
KKNIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSSDVVCMALGRVPTGEQ
RCRFLAVGLSDNTVRIVSLDPADCLSPLSMQALPEPPESLCIVEMGGTEAKEETGETGSV
GGLFLNIGLQNGVLLRTVLDTVTGDLSDTRTRYLGLRPVKLFRITMQGSEAVLAMSSRSW
LSYTYQNRFHLTPLSYESLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSHP
VQFTPRKFVIHPDSNNLVLIETDHNAYTDATKMERKQQMAEEMVESVTEEQREMAAEMAA
QFLNEELPESIFGAPKAGSGMWASVIRIINPISGQTLDKISLEQNEAAHSISLLKFASRG
DDQFILVGVARDLVLQPRSLTAGYIYAYQLKDNGEKLEFLHKTEVEEVPAAIASFQGRCL
IGVGKFLRIYDLGKKKMLRKCENKHIPNFVIGIHVTGSRIVVSDIQDSFHFIRYKRQENQ
LIIFSDDTNPRWITASCMLDYNTVAGADKFGNITVVRLPEDISDDVDEDPTGNKALWDRG
LLSGASQKVDIVMNFHIGEIVTSLQKATLIPGGSESLVYTTLSGGIGMLVPFTSHEDQDF
FQHLEMYMRSENPPLCGRDHLSFRSYYFPIKSIIDGDLCEMFNSMDPGKQKGVAEELDRT
PSEVSKKLEDIRTRFAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtataacttaactctgcaaagagctactggtattgcacatgcaatccatggc
aacttttctggaagcaagctgcaagaaatagttgtatccagaggcaaaatattggaactt
ctaaaacatgacccaaatactggaaaatgttaccctttgttgtcagtggaaatatttgga
acaattagagctcttattcctttcagactgactggtggttctaaagattacattgtggtt
gggtccgactctggaagaattaccatcttggaatacataccccagaagaatgtatttgaa
agggttcatcaagagacatttggtaaaagtggttgtagaaggattgttcctggacagtac
ctagctgtggatcctaaaggaagagctgttatgataggtgcagttgaaaaacaaaaattg
gtatacatattaaacagagatgcacaagctagactgactatttcttcacctctagaagct
cacaaagctaacacactggtttatcacatagttggagttgatgttggttttgaaaatcca
acatttgcttgccttgaaattgattatgaagagtcagacagtgatccctcaggagaagta
gcagaaaaagcacaacaattactgacctattatgaactggacttgggattgaaccatgtt
gttagaaagtactctgaaccacttgatgagcatgccaattttcttgtatcagttcctgga
ggcacagatggaccaagtggtgtactgatttgttctgagaactatgttacatacaaaaat
attggagaccaaccagatattagatgtcctattcctagacggagaaatgatcttgatgat
ccagaaagagggatgatctttgtatgtagtgctacccataaaactaaatccatgtttttc
ttcctggctcagacagaacaaggagatatatttaagataactttagacacagatgaagac
atggtaacagccataaatttaaagtattttgacacagtaccagtggcagctagcatgtgt
gtgctgaaatctggtttcctttttgttgcatcagaatttggaaacagttttctgtaccaa
atagcacagttgggtgatgatgacgatgagcctagatttagtagtaacacaccattagat
gagggtgacactttcttcttttcaccacgatctctgaaaaatttagtacaagtagatgaa
gtagacagcctttctccaattatgtcatgccagattgcagatttggctaatgaggataca
ccccagttatatacactgtgtgggagagggccaagatctactctacgagtcttgagacat
ggtttagaagtatcagaaatggctgtttcagaactgcccggtaatcctaatgctgtatgg
actgtaaagaaaaatgttgacgaggaatatgatgcttatattattgtgtctttcgtcaac
gctactctggtattgtccattggtgaaacagttgaagaagtaacagattctgggttcttg
ggaacaacgcctactttatcttgttcacagcttggagatgatgctttggtgcagatttat
ccagatggaattcgtcatattaggtcggacaagcgtgtaaatgaatggaagacacctggg
aagaagaatattgttaagtgtgctgtcaatcagagacaagtcgtcatagctctgacaggt
ggtgaattggtctactttgaaatggacccaacaggacagcttaatgaatatacagagagg
aaagagatgtcctcagatgttgtatgtatggctctgggacgtgtccctacaggtgaacag
agatgtagattcctggctgttggtctgtcagacaatactgtcaggattgtttcattagac
cctgctgattgtttatcgccattgagtatgcaggctttgccagaacctcccgagtctttg
tgtattgtagagatgggcggtactgaagctaaagaggaaacaggagagactggaagtgtg
ggaggtctcttcctcaatatcggacttcagaatggtgtattactgagaacagtattagac
acagtaactggtgacctgtctgatacaaggaccagatatttaggattaagaccggtcaaa
ctctttagaattacaatgcagggatctgaagctgtgttagctatgtcaagtagatcctgg
cttagttatacctatcagaacagatttcatcttacaccattgtcatacgaatctctggag
tatgcatcaggatttgcctctgaacagtgtccagaaggcattgtagctatctctacaaac
acgcttaggattttagccttggagaaacttggagcagtgtttaaccaggtgtcacatcca
gtacaatttactccaagaaaatttgtgatacacccggattctaacaatcttgtcctaata
gaaactgatcataatgcttacactgatgctacaaagatggaaagaaaacaacaaatggct
gaggaaatggtagaatctgtgacggaagaacagagggaaatggcagcagagatggctgca
cagttcttaaatgaagaattaccagagagtatatttggtgcacctaaggcaggatctggc
atgtgggcgtcggtcattcgtatcatcaatcctatcagtggtcagacactggataaaata
tcacttgaacaaaatgaagctgctcatagtatatcactactgaagtttgccagtcgtgga
gatgatcaatttatattagtgggtgtggccagagatcttgttctacagcctaggtccctg
acagcgggttatatctatgcctaccagttaaaagacaatggagaaaaattagaattctta
cataaaacagaagtggaagaagtgccagcagcaattgcttcattccaaggaagatgtctt
attggtgtgggcaaatttttaagaatttatgatcttggcaagaaaaagatgctcaggaaa
tgcgaaaataagcatatcccaaactttgtgataggaattcacgtcacaggaagtcgtatt
gttgtgtcagacattcaggacagttttcattttatccgttacaaaagacaagaaaatcag
ttaattatattctccgatgatacaaatcctagatggattactgcttcgtgtatgttagat
tataatacagtagcgggagcagataaatttggaaatattacggtggttcgtctgccagaa
gatatcagtgatgatgttgatgaagatccaacaggaaacaaggcattatgggatagaggt
ctactgagtggtgcatcacaaaaggttgatatagtaatgaattttcatataggagaaata
gtaacatctctacagaaagccaccctaatccctggaggttctgagtctctagtctacacc
acgctatctgggggtattggtatgctggtaccatttacttcacatgaggaccaagatttc
ttccagcatctagagatgtacatgagatcagagaatcctcctctgtgtgggagagaccat
ctatcatttagatcatattactttcctataaagagtatcattgatggagacctgtgtgaa
atgtttaattctatggatcctggtaaacagaagggtgtggcagaagagttagatagaaca
cctagtgaggtatcaaagaagctagaagacataaggacaagatttgcattctaa
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integrated database retrieval system
