Mytilus californianus (California mussel): 127701661
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Entry
127701661 CDS
T08804
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcaf03041
]
127701661
Spliceosome [BR:
mcaf03041
]
Common components
Common spliceosomal components
General mRNP proteins
127701661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
127701661
NCBI-ProteinID:
XP_052061614
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDFDVEAMLEAPYRNKEDDGRGDASSYDRGDRRKRRGDEDRYRDRRDRDRGESDRDRR
RDRDRKRNDRSRDSRRSRSRERRRSRDRGSGRRSRSFDRFKKRSPPRRKSRSRSRERGRD
RSSSTSPFKFTRLAGPDLTPEERDARTVFCMQLAARIRPRDLEEFFSSVGKVRDVRLIMD
NKTRRSKGIAYVEFYDTESVPLAIGLTNQKLLGVPIIVQPSQAEKNRLANATNILTKGLK
GPMRLYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETTRSQGYGFITFTDAEEAKKA
LEQLNGFELAGRPMKVGHVTERQVELQQNSMLDSDEMDRAGIDLGATGRLQLMAKLAEGT
GFQIPEYAASALNMGPGPAPPNVSAIMGNNPQPQQQSAPPIATQCFMLSNMFDPTSETKP
SWDQEIRDDVIDECNKHGGVLHLFVDKASPQGNVYVKCPTIAAAVASVNALHGRYFAGKM
ITAAYVPLPNYHSLFPDAVRANQLLLPSTQALQAGYSGIFNNMQQQPMIR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgattttgatgtagaagctatgcttgaagcaccttacagaaacaaagaggat
gatggaagaggagatgcttcatcttatgacagaggagaccgaaggaaaagaagaggtgat
gaagatagatacagagatagaagagatcgggatagaggagaaagtgaccgtgatcgtaga
agagatcgtgatagaaagagaaatgaccgtagcagggacagcagaagaagccgaagtagg
gaaagacgtaggagtcgtgatagaggaagtggcaggagaagtagaagttttgacagattc
aagaagaggtctccaccaaggagaaaaagtcgcagcaggtctcgtgaaagagggagagat
cgtagctctagtacaagtcccttcaaattcactagattagcaggacctgatcttactcca
gaagagagagatgcaagaactgttttttgtatgcagcttgcagccagaattcgtcccaga
gatctggaagaatttttctcttcagttggaaaggttcgagatgtcagattgattatggac
aacaagacaagaagatccaaaggaattgcatatgttgagttttatgatacagaatcggtg
ccattagctattggactcacaaatcaaaaacttttgggtgttcctataattgtgcaacca
tcacaagcagagaaaaatagacttgccaatgctacaaacatattaacaaaaggattaaaa
ggacctatgagattatatgttggttctttgcattttaatataactgaggaaatgttgcgt
ggtatatttgaaccctttggcaagattgacgatattaagctgatacgagaccatgaaact
acaagatctcaaggctatggttttatcactttcactgatgcagaggaagcaaagaaagct
ctggaacagttgaatggatttgagcttgctggtagaccaatgaaagttggtcatgtgaca
gagagacaagttgaattacaacagaattccatgttagatagtgatgaaatggatcgtgca
ggaatagatctcggtgcaactggcaggttgcaattgatggcaaaacttgctgaaggaact
ggattccagataccagagtatgcagcttctgctttaaacatgggacctggtcctgcacct
ccaaatgtgtcagcaatcatgggaaataatccacagccacaacaacagtcagccccacct
atagctactcagtgttttatgttgtccaacatgtttgatcccacatcggaaacgaaacct
agctgggaccaagaaatccgagatgatgttatagatgaatgtaataaacatggtggtgtt
ttacatttgtttgttgacaaagcatcaccacagggcaatgtttatgtcaaatgtcctacc
atagcagcagcagtggcatcagtcaatgcattacatggtcgttattttgcaggcaaaatg
ataacagcagcctacgttccactacctaactatcactccttattcccggatgccgtcaga
gccaatcaactgttgttgccatccacacaagctttacaggcaggatattcagggatattt
aacaacatgcaacagcagccaatgatccgatga
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