Mytilus californianus (California mussel): 127702311
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Entry
127702311 CDS
T08804
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127702311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127702311
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127702311
mRNA degradation factors
5'-3' decay
Decapping complex
127702311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
127702311
NCBI-ProteinID:
XP_052062404
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
MDDRGSPSSSLNSASTGDTGHLLHELMNLQKSNAMSSASISSTLNMRESADVPGPGEATA
PTINELMQTFYSHSQPSHRQLITLQGSDTVNSFSVYGQEVDVVASKPMSTGILSQPTTGS
NKVKITPVVKYDWEPLFYVGNLVAIHRNNTYAAYTLRGKSGGVVRIINRKTAERALLKDF
AGRVIDIAFAHTDDILIGAVDEIGNLMVYHVKETDDRKLIVLLSLHIRRPDGEQPSEFHR
VIWCPFIPDDCDDSSMTESSTQDASRVLVLTHNEKAEIWNIELVTKEHGNGPLDAEDVDF
GLIKITSHTQPVMDAAFSPDGTALATASLDGEVKFFQVNMNESTSPRCLHQWKPHEGKKL
SSLFFLDDHKNSSPDAQFWKFAVTGAENNQEIKIWSCESWTCLQTLTFVCAPGLPSNFQI
DPCMKAALDLGAKYLILTDIKRKVLYVLQIFQDNTNNTAHFSSISEFILAQPCLSFAILD
ASKKRFKKTGDDSNLDDITTGELIKDDNDDNEQKPDVTSSGVQIKLYTVHPKALQELQIR
FQPESSAPPPPTPSISTVSHDDTGIQDALSDLSMDTNIHNNSQDLSHPLLLTPDAFTSSP
RKAQADTTVEQTRTSMGSSTSSFTHVTGLQEELYSPRSSQGNQSVISEGSTITQTPNSKE
FSPHIVNGETTPGSVPLPPVSSTEENELETPKSKAQSGENTPISLERLNNVCMDDFFDTQ
GSRQTSERTLDTASTTGFEVVEGSQKPKSPKESFDENDEEVAEVLGETYDEEEESKDVEG
TQPFVEQSSEKSDMESTQGSDKVIRAWPLPPDVSSEQGEEEEENEQCNYHDQDEDVQVEE
EEVVCEEEEEETSREKEEPVPEVSSEEIEEHILEEQSEESEQEGPKEAPVAEKVKPQIII
KEVPIRIQEVREIVRETVDRKALSQLQDNIQNILNALESQNGVIERLQEQLADQQEKQNE
LQRQQIEIEQLRHMSQQPQPNIEEHLGKLEGIVTSRVERMFTQHAQKENQRINQIMQQSE
TREKQRHERLQHTLVQTLQKSVASNVEDQVRDEMRNTVLPAVTRSLEPVKDQLHQELAQK
LTATDSLLKDNIGKMIRSRQTTEAIGLAAGNALQTPIQAAYREAFQNIVIPNFDRATQNM
FQQVNEAFTKGTKEYIRTLETHLDIIKQKHTEARDPIVAQMRKLADSFQSSAETIKAQVT
ASIQSQVQNEMQNSFLSLQETLIRAVRQAVKDEVNTAVQEQGATISSNVLDAMRSGAVTP
VPTSPDPQQARTHIMQLLRQGQLNAAFQQALSAANLELVVFVCETVNPAQIFNQTPCPLE
QPVLLSLIQQLSADIGQNTELKHKYLEESVMNLDLTNKITQEHMRGVLYSLIQKLKNYIS
QHPNDKTCRHLKMLQMASESLLK
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggacgataggggtagcccgtcatcatctctaaactcagcgagcaccggcgacacaggt
catctcttgcatgagcttatgaacttgcagaaatcaaatgccatgtccagtgcaagtatt
tcatccacattgaatatgagagaaagtgctgatgtaccaggaccaggggaggcaactgct
ccaacaataaatgaacttatgcagacattctacagtcacagccagccttctcataggcag
cttataactttacaaggatctgatacagtcaacagtttcagtgtatatggacaggaagta
gatgtagtagctagtaagcccatgagtactggtatcttgtcacagccaacaacaggcagt
aataaggttaaaattacaccagttgtgaagtatgattgggagccattattttacgtaggg
aaccttgtagctatccatcgtaataacacatatgctgcctatacattaagaggaaagtca
ggtggtgttgtcaggattattaacaggaagactgcagagagagcactattgaaagacttt
gctggtcgtgttatagacattgcctttgctcacactgatgatattttaattggtgccgtt
gatgagattggtaaccttatggtgtaccatgtcaaagaaacagatgataggaaactaatt
gtcttattgtctttgcacattagacgaccagatggtgaacagccatcagaattccaccgt
gttatctggtgtccatttatacctgatgattgtgatgatagtagcatgactgaatcttct
acacaggatgcttctagagtattggtcttgacacataatgaaaaagcagaaatatggaat
attgaactggtcaccaaagaacatggtaatggaccactggacgcagaagatgtggatttt
ggtttgattaaaattactagtcacacacagcctgtaatggatgctgctttctcaccagat
ggcactgcattagccacagctagtctggacggtgaagtcaagttcttccaagttaatatg
aatgaaagtacttcgccaagatgtttacaccaatggaaaccacacgagggtaaaaagttg
tcttcccttttcttcctggatgatcataaaaattctagtcctgatgcccagttttggaaa
tttgctgtcacaggagcagaaaataatcaggagatcaaaatatggagctgtgaatcctgg
acttgtttacaaacattaacctttgtttgtgctcctggactgccatcaaattttcagata
gatccctgtatgaaagcagctttagaccttggtgccaaatacctcattcttactgatatt
aaaagaaaggttctatatgtattacagatttttcaagacaatacaaataacactgcccat
tttagttcgatctcagaatttatcttagcccagccatgccttagctttgccattcttgat
gccagtaaaaagaggtttaaaaagacaggagatgactctaaccttgatgatatcacaaca
ggtgaactaatcaaagatgacaatgatgataatgaacagaaaccagatgttacttcctca
ggtgtacagataaaactgtacactgtacatcccaaagctttacaggaactacagatcaga
ttccagccagaatcttctgctccacctccacccacgccatcgatcagtaccgtgtcacat
gatgatacaggtattcaagatgctttatcagatcttagtatggatactaatattcacaat
aatagtcaagatctatctcatccattactgctgactcctgatgcctttacctctagtcct
agaaaagcacaagcagataccacagtggaacaaactagaaccagtatgggatccagtaca
agttcatttactcatgttactggtttacaagaagaactttactctcctcgtagtagtcag
gggaaccagtctgttatttcagaaggcagtaccatcactcaaactcctaactcaaaagaa
ttctctccgcatattgttaatggggagacaactccaggatcagttccgttaccaccagtg
tcgtctacagaagaaaacgagctagagacaccgaagtctaaagctcagtctggagaaaac
actcccatatcattagaaagactaaataatgtttgtatggatgatttctttgatacacag
ggtagtcgtcagaccagtgaaaggacccttgacactgccagcacaactggatttgaggtt
gtcgagggaagtcagaaaccaaaaagtcctaaggaatcatttgatgaaaatgatgaagaa
gttgctgaagttttaggtgaaacatatgatgaagaagaagaaagcaaagatgtggaagga
actcagccgtttgttgaacagtcttctgagaagagtgacatggaatctacacaaggaagt
gataaggtcatcagggcttggcccctgccaccagatgtcagcagtgaacagggggaggaa
gaggaagaaaatgaacaatgtaattatcatgatcaggatgaggatgtacaagtagaggaa
gaggaggtggtatgtgaggaagaggaggaggaaaccagtagagagaaagaggaaccagtg
ccagaggtcagcagtgaagaaatagaagaacatatattggaggaacaatctgaagaatca
gaacaggaaggacctaaagaagcaccagtggcagagaaagtcaagcctcaaataataatt
aaagaagtacctattagaatccaggaagttagagagattgtcagagaaacagtagataga
aaggctttgtcccagcttcaagataacatacagaacatccttaatgccttggaatctcaa
aatggtgtgatagaaagactgcaggagcaattagctgaccaacaggagaaacagaatgaa
ttacagagacaacagatagagatagaacaactccgacacatgtcacaacaacctcagcca
aacattgaggaacatttaggcaaattagagggcattgttacatctcgtgtggagagaatg
tttactcagcatgctcaaaaagagaatcagagaataaatcagatcatgcagcagtctgag
acgagagaaaagcagcgacacgaacgattgcaacacacactggtacaaacattacagaaa
tctgtagccagtaatgtggaggatcaagtcagggatgaaatgaggaatactgtcttacca
gctgtaacaaggtctttagaacctgttaaagatcagctgcatcaagaattggcacagaaa
ttaacagccacagattcattactgaaagataatattggtaaaatgattagatctaggcaa
acaacagaagccataggattagctgcaggcaatgctttacagactccaatacaggcagca
tatcgagaagcattccagaatattgttatacccaactttgatagggccacgcaaaatatg
ttccaacaagtcaacgaagcattcaccaaagggacaaaagaatatattagaacactggaa
actcatttggacataattaaacagaagcatactgaggccagagatcctattgtagcacag
atgaggaaattagctgattctttccagagttctgctgaaacaataaaagcacaagtcaca
gctagtatccagtctcaggtccaaaatgaaatgcagaattccttccttagtctgcaagaa
actttgatcagagctgtaaggcaagctgtaaaagatgaagttaatactgctgtacaggaa
caaggtgctactattagtagtaatgtacttgatgccatgagatcaggggctgtaactcct
gtacctaccagtcctgatccacaacaagctagaacacatatcatgcagttactgagacaa
gggcaattaaatgctgcatttcaacaggctttgtcagcagctaatctagaacttgtagta
tttgtatgtgagactgtgaaccctgcccagatattcaaccaaacaccctgcccactagaa
cagccagtattgctatcccttatccagcagttgtctgctgatatcggtcaaaatacagaa
cttaaacataaatatttagaagaatctgtgatgaatttagatttgacgaataagataaca
caggagcacatgagaggagtgttgtacagtcttatacagaaactaaagaactatatcagt
cagcatcccaatgataagacatgtagacatcttaaaatgttacagatggcctcagaatct
ttgctgaagtag
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integrated database retrieval system
