Mytilus californianus (California mussel): 127704177
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Entry
127704177 CDS
T08804
Name
(RefSeq) low-density lipoprotein receptor-related protein 4-like
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcaf04131
]
127704177
Membrane trafficking [BR:
mcaf04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127704177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
DUF5050
SGL
Vgb_lyase
EGF_LRP2
cEGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
127704177
NCBI-ProteinID:
XP_052064026
LinkDB
All DBs
Position
Unknown
AA seq
2147 aa
AA seq
DB search
MKAFIAFPFIWTFILGLKIPEPETKSSCTCPDHFFSCGNCICIPKKWVCDGDNDCSNNQD
EKHCDQTCLPNHFTCNNQRCVKIEWLCDGDNDCGDDSDELSCPSKNCSTDQFPCSDGSCI
PKHWKCDHDPDCTHGEDERNCAVTCNEHQFKCQDKSSCIPKEWRCNSILDCSDGSDEDNC
NEQQAFCSKHEFTCLQTSTCVPLKMRCDGKNDCKSGEDELLCEVSDKSDCSADEYVCGDG
SCIAMDWVCDGVTDCANLMDEQNCTFLSCNPNQFRCDNDHCISRSKRCDGVDDCSDDSDE
KGCETMNGEIQCSPGQFSCGNEKCISLEKKCNTFDDCGDSSDELNCGEEVLIYAQGQYLR
KIALSMPNYPDVKIPLKGVKKIIAIDYNPISNMIYWSDQDLNTISAAYLDGSGQKIISSK
VKSSDGIAVDWINKVLFWTDTGSDKIEQANLNGTEQITILSKDLDEPRDIAVDPVEKFIY
WSDWGQQPKIERSRYNGTDRQTLIDSEIQWPNGLALDLADRKIYWGDAKKQRIERANLDS
SNREVVISTDIPHLFGLSLLGNHIYWSDWKDTSLNRCDKRTGKNKVTILKHHSRNLGMFM
DVKAIKVKLIKGDRNKYCGFDEFHCENDLCIGNKKRCNGKNDCGDNSDEIDCDLPATCDK
ENGGCQQTCRIFGQQARCDCFPGYYLLSDMRNCKDINECNFEGTCSQKCTNVPGTYKCYC
VDGYTLKPDGRGCKADGGKAYLIFANRVDIRRVLPDKSEYDSILQGLQNAIALDFHIDKN
YVFWSDVALDKIKRAYINGSEIKEVVQYGLESPGGLAVDWVHDLLFWTDAGTSTIEVTDL
DGVYRKVLIWENLEKPRALVAHPGNRSIFWTDWGTTPKIESSCMDGSYRNVIANTSLFWP
NGLTIDYTTDKLYWADAKHHVIECADLDGSNRRTVLNKGLPHPFALTLFEDELYWTDWNT
KSINKANKFTGNDVETVHNRLHYPMDIHTFHPQRQPTMKNVCGKNNGGCSHFCLPNWHGY
SCACLTGQHLKKDNKTCVESMNRFVVFSTMSDLRRISVDTPDRTDVVLPLNKVLSAVGID
FDAKNDMIYWTDTDLNVIKRAHWNGSHEKVVIGNQVESPVGVAIDWIGRKIYWTDQDTDF
IEVANLNGSMRSILISTSLDKPRDIIVDPLEGFMYWSDWGSRPKIERAGMDGNRRQVLIS
NNITWPNGLALDKKLKRLYWTDGGRSVIESVNLDGTDRQIIISVNVPRPFGIALFENTIY
WTDKLNKGVYSANKYNGSGREVIASQLDNVMDIKMFYKPQPRGKNPCANDNGGCSHLCLI
STTGYTCVCPTGILMSPDGKTCNKDMSNFIVFARRTDIRKISLDVNYIADVVIPLGEIRN
AIAIGVDRVAGKLYWTDTILDVIMKANLDGSQVEQFIKHGLDTPDGLAVDEIGRKIYWTD
TGLNRIEVADLVTGMRKVLIWDNLDKPRDLTLYYEKGYMYWTDWGKLPKIQRADMDGSNR
TVLVDKNLGWPNGIVIDKQSQRIVWADAKMEVIESSDLNGGNRRVIISNVNHPYGLTITE
RHIYWTDWQKMAIFKADKDTGSNLLVIRRTLPGLMDLQAVIRSPDDDLHKLENKCENNGG
CSHLCLPNHSGITCSCPTGLQLKHNGKTCLTLPSKYLLFASRGSLRRISLDTPDYTDTFL
PMSDLHNVISLDYDYQKQKMYFTDVHLDVVRRANLDGTGLQSVVSENLETTDGLAVDWIA
NNLFWTDTGRDVIEVSSTDGTNRKSLITEDLDEPRAIALYPQKGLLYWTDWGSPPKIEKA
YMDGSNRKIIIKTDLGFPNGLSVDFKAKRLYWVDARLDKIETSDLMGQNRVTLISNVPHP
FGLTVYGPHIYWTDWQSEKIERADKNSGKDRAVIQRHLEGLMDIVVVAKDRQSGTNWCST
GNGGCSHLCLARPRGRSCACPDKTTQEPCYTYPVTDSGMENQIPGYNAADADECTDEDEK
DGICEKPKNVPQAVTALGGKETAMIALSVGIVVIVALLVFVVWRVKKRRRQAFLTESDEF
VRLTFSNPNYQKSSTETINLERSSSAESQEWKIFRYSKKDQQVSILKPSRETKSRGSERA
ALVQQMDSGAVSPSLPSRERQSKLFKDRTSNKDKDVISKVPYKPVKT
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcattcattgctttcccatttatttggacttttatattgggactaaagattcct
gaaccagaaaccaaaagctcctgtacatgtcctgatcatttcttctcctgtggaaactgt
atatgtattccaaagaaatgggtctgtgatggagacaatgattgctccaataaccaggat
gaaaaacattgtgatcaaacatgccttccaaaccacttcacatgtaacaaccagcgatgt
gtaaaaatagaatggctttgtgatggagataatgactgtggggatgacagtgatgaactc
agttgtccctcaaagaactgcagtactgatcagttcccgtgcagtgatggaagttgtata
cccaaacattggaaatgtgaccatgaccctgactgtactcatggagaagatgaaaggaac
tgtgctgtgacatgtaatgaacaccagtttaaatgtcaagacaagtctagctgtatacct
aaagaatggaggtgtaactctatactggactgttctgatggtagtgatgaagataattgt
aatgaacagcaagccttctgtagtaaacatgaatttacctgtctacaaacttctacatgt
gttccactgaagatgagatgtgatggtaaaaacgattgtaagtctggtgaagatgaatta
ctttgtgaagtgtcagataaatctgactgctcagcagatgagtatgtatgtggtgatggg
tcctgcatagctatggactgggtctgtgatggagttactgactgtgcaaacctgatggat
gaacagaattgtacttttttgtcctgtaatcctaaccagttcagatgtgacaatgatcat
tgtatcagcagatctaaaagatgtgatggagttgatgattgttctgatgacagtgatgaa
aaggggtgtgaaaccatgaatggagagatacagtgcagtccaggacagtttagttgtggc
aatgagaaatgtatctccttagaaaagaaatgtaatacatttgatgactgcggggattct
tctgatgaactgaactgtggcgaggaggttctgatttatgcccaaggacagtacttaagg
aagatagcactgagcatgcctaactatcctgatgttaaaataccactgaaaggtgtgaag
aagatcatagctattgattacaacccaataagtaacatgatctactggagtgaccaggat
ctcaacactataagtgcagcttatctggatggttcaggtcagaaaataatatcgagcaaa
gtgaaatcatctgatggtatagcagtggattggatcaacaaagtgctattctggacagat
acaggctcagataagatagaacaggcaaatcttaatggtactgaacaaattactatcctg
tctaaagatcttgatgaaccaagggatattgcagtagacccagtcgaaaaatttatatat
tggtctgactggggtcaacaacctaaaatagagaggtcaagatataatggaacagacaga
caaactcttattgacagtgagatccaatggcctaatggactagcattagatttggcagac
aggaagatttattggggagatgctaagaaacagagaattgaaagagctaacttggatagt
tcaaacagagaggttgtaatatcaactgacatacctcatttgtttgggctgagtttgctt
ggtaaccatatttactggtcagactggaaggacacatctttaaatagatgtgataaaagg
actggaaagaacaaagtcaccatactgaaacatcatagcaggaatctaggcatgttcatg
gacgtcaaggctatcaaggtcaaacttataaaaggagacagaaataaatactgtggattt
gatgagttccattgtgagaatgatctttgtatcgggaacaagaaacgatgtaatggaaag
aatgactgtggggataattcagacgagatagactgtgatttaccagcaacttgtgacaag
gaaaatggaggttgtcagcagacgtgtcgtatatttggccagcaggcaagatgtgactgt
ttcccaggctattatctactgtcagacatgagaaactgtaaagacataaatgaatgcaac
tttgaaggcacatgtagtcagaagtgtacaaatgtgccaggaacatataaatgttattgt
gtagatggatacacattaaagcctgatggcaggggctgtaaagctgatggtgggaaagcc
tatttgatctttgccaaccgtgttgacatcagaagagtcctaccagataagtcagagtat
gattctatactccaaggtttacagaatgccatagcgttagacttccatatagataagaat
tatgtgttctggtctgatgtggctctagataagattaagagagcttacattaatggtagt
gagattaaagaagttgtacagtatggcttagaaagtcctggaggcctagctgtagattgg
gtacatgatctgttgttttggactgatgctggaacatctacaatagaagtgacagattta
gatggagtctatcgtaaagtgttgatatgggagaacttagagaaaccaagggcacttgta
gctcatcctggaaatagatcaatattttggacagattggggaactacacctaagatagag
agtagctgtatggatggtagttataggaatgttattgctaacacatcactgttctggcct
aatggtctaactatagattataccacagacaaactgtactgggctgatgctaaacatcat
gtcatagaatgtgctgatttagatggttctaataggagaaccgttctaaataaaggattg
ccacatccttttgccttgaccttgtttgaagatgaactttattggacagactggaataca
aagagtataaacaaagccaacaagtttactgggaatgatgtagagactgtacataacagg
cttcattatcccatggatatacatacgttccatccgcagaggcagccaacaatgaagaat
gtctgtggtaaaaacaatggaggatgcagccatttttgtttgccaaattggcatggttac
agctgtgcttgtctaacaggacaacatctgaagaaggataacaaaacatgtgttgagagt
atgaatcgttttgtggtgttttcaaccatgtccgatctgagacgtatcagtgtagataca
cctgacagaacagatgtggttcttccccttaataaagtgctgagtgctgtggggattgat
tttgatgcaaagaatgatatgatatattggactgatacagacctgaatgtcatcaaaaga
gcacattggaatggcagtcatgagaaggttgtcattggaaaccaggtggagtctccagta
ggtgtggctatagactggattggtcgtaagatttattggacagaccaggatacagatttt
atagaagtagccaatctgaatggtagtatgaggagtatcctgatctctacaagtctagat
aaacctagagacatcattgtagatcctttggaagggtttatgtactggagtgattgggga
agcagacctaagatagaaagagcaggaatggatgggaatagaagacaggttctaatcagt
aacaatatcacatggcccaatggtctagccctggacaaaaaacttaaacgtctttattgg
acagacggaggaaggagtgttatagaatctgtcaatttggatggtacagacagacagatt
ataatatctgtgaatgttcctcgaccatttggcattgctttgtttgaaaatacgatctac
tggacggacaagttaaacaagggagtttactctgcaaacaagtataatggatcaggacgt
gaagtaatcgcctcacagcttgataatgtgatggacatcaaaatgttttataaaccacaa
ccaaggggtaagaatccatgtgctaatgacaatggtggctgtagtcatttatgtttgata
tcaacaacaggatacacatgtgtctgtcctacagggatactaatgtcaccagatgggaag
acttgtaataaagatatgagtaattttattgtgtttgccaggagaacagatatcagaaag
atatcattagatgttaattatatcgctgatgtagtgatacctctcggtgaaatcagaaat
gctattgctataggtgtagatagagttgcagggaagctatattggacagatacaattcta
gatgtgataatgaaagctaatttagatggatctcaggtggagcaatttataaaacatgga
ctggacacaccggatggactggcagtagatgagattggtcggaagatttactggacagat
actggattaaaccgcattgaagtggctgacttggttactgggatgagaaaagtgttgatt
tgggataacctagataaacctagagatttaactttgtattatgagaaggggtacatgtat
tggacagattggggtaaactacctaagattcagagggctgatatggatggtagtaatagg
acagtattagttgacaaaaacctaggctggcctaacggaattgtcattgacaagcaatcc
cagagaattgtatgggctgatgctaaaatggaagtgatagagtcatcagatttaaatggt
ggtaatcgtcgtgtcatcatctctaatgtcaatcatccctatggactgaccattactgag
agacatatatactggacagactggcagaaaatggcaatatttaaagcagacaaggatact
ggaagtaatttattagtcataaggagaacattacctggactgatggatctacaggctgtt
atcaggtcaccagatgatgaccttcacaaactagagaacaaatgtgagaataatggaggc
tgcagtcatctctgtttaccaaatcatagtggaatcacatgttcatgtcctactggatta
cagctcaaacacaacggaaaaacttgcttaacattgccaagcaagtacctgttgtttgcc
agtagaggcagtttaaggagaatctcattggatactcctgattatacagatacatttctt
cccatgtctgacctccataatgttatatcacttgactatgactaccagaaacagaagatg
tactttactgatgttcatttagatgttgtcagaagagctaatttagatggtacaggtttg
cagtctgtagtatcagagaatctagagacaaccgatggacttgctgtagactggattgct
aataatttgttctggacagatacaggtcgtgatgttatagaagtatcatccactgatggg
acaaacagaaaatctctgatcacagaagatttagatgaaccaagagctatagctttgtat
ccccagaaaggattgttatattggacagactggggatcaccacctaaaatagaaaaagca
tacatggatggtagcaataggaaaattattatcaaaacagatttaggttttcccaatgga
ttatcagtagattttaaggcaaagagattatattgggttgatgccagattagataagata
gaaacttcagatctgatgggacagaatcgtgttacattgattagtaatgtcccacatcca
tttggtctgactgtgtatggtcctcatatctactggactgactggcagtcagagaaaata
gaaagagcagataaaaattcaggaaaagatcgtgcagtcatacagagacatctagaagga
ttgatggacatagtagtggtggcaaaagatagacagtctggaacaaactggtgcagtaca
ggaaatggtggttgtagtcatctttgtcttgccagaccccggggaagatcatgtgcctgt
cctgataaaactacacaagaaccttgttacacatatccagtcacagattctggaatggag
aaccagatccctggatataatgctgctgatgctgatgagtgcacagatgaagatgagaaa
gatggaatttgtgagaagccaaagaatgttccccaagcagtaactgctttgggaggaaaa
gaaacagccatgatagctttgtcagttggaattgtagttattgtagccttactggtgttt
gttgtctggagagttaaaaagagaagaagacaagcattcctaacagaatccgatgagttt
gtacgtctgacattttctaatcctaattaccagaaaagtagtacagaaaccataaactta
gaaagatcttcatcggctgaatctcaggaatggaaaatatttagatatagtaaaaaagat
caacaagtttcaattttaaaaccatcaagagagacgaagtccaggggttctgaacgtgct
gctttagtgcaacaaatggactctggtgctgtgtctccttcactaccaagtcgagagaga
caaagtaaattgtttaaagacagaacttctaataaagataaggatgttatttctaaagtt
ccttataaacctgttaaaacatga
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