Mytilus californianus (California mussel): 127706028
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Entry
127706028 CDS
T08804
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03030
DNA replication
mcaf03410
Base excision repair
mcaf03420
Nucleotide excision repair
mcaf03430
Mismatch repair
mcaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127706028
03410 Base excision repair
127706028
03420 Nucleotide excision repair
127706028
03430 Mismatch repair
127706028
03440 Homologous recombination
127706028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcaf03032
]
127706028
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127706028
Enzymes [BR:
mcaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
127706028
DNA replication proteins [BR:
mcaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
127706028
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
127706028
MMR (mismatch excision repair)
DNA polymerase delta complex
127706028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
127706028
NCBI-ProteinID:
XP_052066377
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MNKKPSSQNGVPPSKKARYNFDDEEDPSAFEEELAMLDEMESETHQDLDGGMGPQDAEAC
AKWIRPPPPDLNVHKDKVVFQQIDVDHYIGKHMPNMPGASSGPVPIVRMFGVTMDGNSVL
AHIHGFAPYFFVPAQPGFKAESCNAFRTALDDAVKKDMRSNREGIQHAVLGVELVTRESI
YGYHGNRKLPFLKITVAIQRLIAPSKRLLEQGFTCPGYTNYGYQSYESNIDFEIRFMVDS
NVVGCSWIEIPAGKYHLRHKSHKNKDDAINPPSISRCQIELDVSWEEFIAHQPEGEWSKV
APFRILSLDIECAGRKGIFPEAEKDPVIQIANMVQKQGESEPFIRNVFTLNTCASVVGSQ
VLSHKKEFDLLKKWSEFVRAVDPDLITGYNIQNFDFPYLINRALTLKVKDFPYLGRISGI
QSVIKEAMIQSKQMGRRENKIINMEGRVQFDLLQILLRDYKLRSYTLNAVSFHFLQEQKE
DVQHSIITDLQNGTDQTRRRLAVYCLKDAILPLRLLGKLMCVINYMEMARVTGVPLPYLL
SRGQQIKVISQLLRKAKEQDLVLPTHRVDPGDEYEGATVIEPNKGYYNMPIATLDFSSLY
PSIMMAHNLCYTTLLNQNTIQKEGLTPDQFIKTPSGNLFIKSTMRKGLLPEILEHLLGAR
KQAKADLKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTAFGRMM
IEQTKCCVEETYTIANGYKHDAKVIYGDTDSVMCKFGVESVEEAMKLGQEAAEFISEKFV
KPIKLEFEKVYFPYLLINKKRYAGLYWTNPVKYDKMDCKGIETVRRDNSPLVANLINMCL
QMILIDRDPDGATEYAKQTISDLLCNRIDISQLVITKELSKTDDEYVGKQAHVELANRIK
RRDPGSAPQLGDRVPYVIIAASKKTPAFMKSEDPIYVLENNIPIDTSYYLDNQLSKPLLR
IFEPILGEKKAESVLLKGDHTRTKTFVTSKVGGLSAFTKKRETCVGCRAVLDREGAVCNY
CKSRESQIYQKEISHLNVLEEKFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMRKKVQKD
LEDHGKVIARFGDPEW
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaaccatcaagtcaaaatggagtcccaccatctaaaaaagcaagatataat
tttgatgatgaagaagatccatcagcttttgaagaagaactggccatgctggatgaaatg
gaaagtgaaacacatcaagatttggatggtggaatgggaccgcaagatgcagaagcatgt
gctaaatggatacgcccaccaccgcctgatctgaatgttcataaggataaggtggtcttt
cagcagattgatgtggatcattatattgggaagcatatgcctaatatgccaggggcatca
agtggacctgtacctatagtcagaatgtttggtgtcacaatggatggaaacagtgtgtta
gcacacattcatggctttgctccatatttctttgttcctgcacaacctggctttaaagca
gagagttgtaatgcatttaggactgccttagatgatgcagttaagaaagacatgaggtca
aacagagaagggatacagcatgctgtgttaggtgtagagctagtcaccagggaaagtata
tatggataccatggaaacagaaaattgccttttctgaagatcactgttgccattcagcga
ctgattgctccttccaagcgactgttagagcaaggatttacatgtcctggttacaccaat
tatgggtaccagtcttatgaaagtaatatagattttgaaataaggtttatggttgacagt
aatgttgttggctgtagttggatagaaattcctgcaggaaaataccatctaagacataaa
agccataaaaataaagatgatgctataaatcctccatccatatcacgatgtcagatagaa
ttagatgtatcgtgggaggagtttattgcacaccagccagaaggagagtggtcaaaagtt
gctccctttagaatacttagtcttgatattgaatgtgcaggaaggaaaggtatatttcct
gaggcagaaaaagacccagttatacaaatagccaacatggtacagaaacaaggagaatct
gaaccgttcatcagaaatgtgttcacactcaacacatgtgcttctgtagtgggctcacaa
gttctctcacataaaaaagagtttgatttgttgaagaaatggtctgagtttgtaagagca
gtagatccagacctcataacaggatataacatacagaactttgatttcccatacctaata
aacagagctttaactttaaaagtcaaggatttcccatatcttggtagaatcagtggtatc
cagtctgttataaaagaggcaatgatacagagcaaacaaatgggaagaagggaaaataaa
attataaatatggaaggaagagtgcaatttgacttattacagattttattaagagattac
aagttgagatcatacacattgaatgcagtgtcattccatttcttacaagaacaaaaagaa
gatgtacagcattctatcattacagatttacagaatggtacagaccagacaagaagacgt
ctagcggtttattgtttaaaagatgccattttaccattacgtctgctgggtaaattaatg
tgtgtcattaattatatggaaatggcaagggtaactggtgtgcctctgccataccttttg
tctcgaggtcaacagataaaagtcatttcacagttactgagaaaggcaaaagaacaagac
ttagtattaccaacccacagggtagatcctggtgatgagtatgaaggagcaacagttata
gaaccaaataaagggtattataatatgccaatagctacgctagatttctcatcactgtat
ccgtccattatgatggctcacaatctatgctacacaacactactcaaccagaataccata
cagaaagaaggattgacaccagatcagttcatcaagacaccgtcaggaaatttatttata
aaatccacaatgagaaaaggtttattaccagaaatccttgaacacttgctaggtgcaaga
aaacaagcgaaggcagatctcaagaaagaaactgacccatttaaaaagcaggtgttagat
ggaagacagctggctctaaagatcagtgctaactctgtgtatgggtttacaggagctcaa
gtaggcaaattgccttgtctggaaatttcacagagtgtaacagcatttggaagaatgatg
atagaacagactaaatgttgtgtagaagagacatacacaatcgccaatggttacaaacat
gatgctaaggttatttatggtgacacagactctgtgatgtgtaagttcggtgtggaatca
gtagaggaggccatgaaactgggacaggaagctgccgaatttatttctgaaaagtttgtc
aaaccaatcaaattggaatttgaaaaagtatatttcccatacttattaatcaacaagaaa
agatatgctggtttgtactggacaaatccagtcaagtatgacaagatggactgtaaaggg
atagaaacagtcaggcgtgacaacagtccactggtagctaatctgatcaacatgtgttta
caaatgatcttaatagacagggatcctgatggtgctacagaatatgccaagcagaccata
tcagatttactgtgtaaccgtatagacatatcacaactcgtcattaccaaagaattgtct
aaaactgatgatgagtatgtaggaaaacaggctcatgtagaattagcaaacaggataaag
agaagagatccaggtagtgctccacagttaggagacagagtaccatatgtcattatagct
gctagcaagaaaactcctgccttcatgaaatcagaggatcctatatatgtgttggagaac
aacattcctatagacacatcatattaccttgataatcagttatctaaacctttactcagg
atatttgaaccaatcttgggagagaagaaagcagaatcggtacttctcaagggtgaccac
acaagaacaaaaacatttgtaacatctaaagttggtggactgtctgcattcacaaagaaa
agagagacctgtgtgggttgtagagctgttttagacagagaaggtgctgtgtgtaattat
tgtaaatcaagagagtcccagatatatcagaaagagatctcacatttaaatgttttggaa
gagaaattttctcgtctctggacacagtgtcaaagatgtcagggaagtctgcatgaagat
gtgctttgtacaagtcgagattgtccaattttctacatgcggaagaaagttcagaaagat
ttagaggatcatggcaaagtaatagctaggtttggtgatccagaatggtga
DBGET
integrated database retrieval system
