Mytilus californianus (California mussel): 127708847
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Entry
127708847 CDS
T08804
Name
(RefSeq) uncharacterized protein LOC127708847
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127708847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcaf03041
]
127708847
03009 Ribosome biogenesis [BR:
mcaf03009
]
127708847
Enzymes [BR:
mcaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127708847
Spliceosome [BR:
mcaf03041
]
Complex A
U1 snRNP components
U1 related factors
127708847
Complex B
127708847
Ribosome biogenesis [BR:
mcaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
127708847
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Tuberin
CMS1
Motif
Other DBs
NCBI-GeneID:
127708847
NCBI-ProteinID:
XP_052069965
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MSYRGRDHNSGRSDRKGYGDFGSDLPKAFGSTSHNFRDGGSGGRGGGGYGGRGRGRGGGG
GFGGRGGSFGGGQRNKNDQPGQNLHKPKWDMGRLMTFEKNFYKEHPNVSARQQHEIMTYY
QSKQISVKGNDLPKPVLQFDEAGFPDYVMQSIQRQNWVSPTAIQSVGWPAALMGRDMVGI
AQTGSGKTAGFMLPAIVHIMNQPHLLRGDGPIVLVLVPTRELAQQVQEVANEFGRQSRIR
NVCVYGGSPKGPQIRDLERGSEICIATPGRLIDLLEAEKTTLKRCTYLVLDEADRMLDMG
FEPQIRKIVEQIRPDRQTLMWSATWPKEVKTLADEFLSDNIMMNIGALQIHANHNILQII
DVCTETEKDYKLMKLLDEIMQEKENKTIVFTETKRRADELTRRMRREGWPVMCIHGDKNQ
QERDWVLQEFRVGKTPILIATDVASRGLDVEDIKFVINFDYPNSSEDYVHRIGRTARANN
TGTAYTFFTQNNCKQAVDLINVLREANQQVNPKLVQLGESARFLGKGRNRYSRGGGRDDR
RGGGGRFGDRDSSRGGRGGGFGNKGGSYGSGGGAGGRSGYGASSGGSGYGGANRSSGFSS
GGQKGFGNTSGGQKGFGNTTGATKGFGNTTGAQKGFGNTSGGQKGFGNTSGGYNQSGGSY
NQTQEGGGHYNLRHPQHDGQQGQMNGYNNGYSGQYNQQWGNQWNTSSQPPLPAGNPPKIP
PPPPV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacagaggaagagaccacaattcagggcgatcagatcgtaaaggatatggagac
tttggaagtgacctcccaaaagcattcgggtcaaccagtcataactttagagacggaggt
agtggtggacgtggtgggggaggctatggtggtagaggcagaggaagaggtggtggtggg
ggatttggtggacgtggaggaagttttggtggaggacagagaaataaaaatgatcagcca
ggacagaacctacataaacctaaatgggacatgggccgccttatgacctttgagaagaat
ttctacaaagaacacccaaatgtttctgcacgacaacagcatgaaattatgacctactac
caatctaagcagatttcagttaaaggaaatgatttgcctaaaccagtattacagtttgac
gaagcaggatttccagattatgttatgcagagtattcaaagacaaaattgggtaagtcca
acagctatacaatctgttgggtggcctgcagcactgatgggcagagatatggttggaata
gcacaaactggttcaggaaaaacagcagggttcatgttacctgcaattgtacacataatg
aatcagccacatctactgagaggagatggaccaattgttctagtcttagtgccaacaaga
gaacttgcccaacaagtacaggaagttgctaacgaatttggaagacaatcaaggatcaga
aacgtgtgtgtgtatggtggatctcctaaaggaccacaaatccgagatttagaaagagga
tctgaaatatgtatagccactccaggcagattaatagatttactggaggcagaaaaaacg
acattgaaaagatgtacatacttagtgctagatgaagctgacagaatgttggacatggga
tttgaaccacaaatcagaaaaattgtagaacaaatcagacctgatagacaaactttgatg
tggagtgctacttggccaaaagaagtgaaaacactagcagatgaattcctgagtgataat
atcatgatgaatataggagcccttcaaattcatgccaatcacaatattctccagataatt
gatgtgtgtacagaaacagaaaaagactacaaattgatgaaattattagacgaaattatg
caggaaaaagaaaacaaaacaatagtattcacagaaacaaagagaagagctgatgaattg
accagacgaatgagaagagaaggctggccagtaatgtgtatacatggagataagaatcaa
caagaaagagattgggttctacaagaattcagagtaggaaaaacaccaattctaatagcc
acagatgtagcgtccagaggtctagatgtagaagatatcaaatttgtgataaactttgat
tatccaaattcatcagaagactatgttcatagaataggcagaacagctcgtgcaaacaat
acaggaacagcatacacattcttcacacaaaataactgtaaacaggctgtagatttgatt
aatgtactacgtgaagccaatcaacaagtcaatccaaaacttgtgcaacttggagaaagt
gctagattcctaggaaaaggtcgtaatcgttatagtagaggaggcggcagggacgacagg
agaggaggaggaggacgttttggtgaccgtgattcaagtagagggggtcgtgggggtggg
tttgggaataagggtggttcatatggatctggtggaggtgcagggggtcgttcagggtat
ggggccagctctgggggatctggttatggaggagcaaatcgcagtagtggattcagtagt
ggggggcaaaaaggattcggaaatacttctggaggacaaaaaggatttggaaatactact
ggagcaacaaaaggatttggaaatactactggagcacaaaaaggattcggaaatactagt
ggaggacagaaaggatttggaaatacaagtggtggttataaccagtctggtggaagttat
aatcaaacacaagagggaggaggacattataatttacgtcatccacaacatgacggtcaa
caaggccaaatgaacggctataataatggttacagtggacaatacaatcagcaatggggt
aatcagtggaacacttcttctcaacctccactaccagctggtaatcctcccaaaataccc
cctcctccaccagtgtaa
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integrated database retrieval system
