Mytilus californianus (California mussel): 127708849
Help
Entry
127708849 CDS
T08804
Name
(RefSeq) uncharacterized protein LOC127708849
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127708849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcaf03041
]
127708849
03009 Ribosome biogenesis [BR:
mcaf03009
]
127708849
Enzymes [BR:
mcaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127708849
Spliceosome [BR:
mcaf03041
]
Complex A
U1 snRNP components
U1 related factors
127708849
Complex B
127708849
Ribosome biogenesis [BR:
mcaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
127708849
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Rotamase_2
Xol-1_GHMP-like
Motif
Other DBs
NCBI-GeneID:
127708849
NCBI-ProteinID:
XP_052069967
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MFARGGVCKLIGTLYQSSASCIVIRYPRNAGRYILRNCSVSTKFADVDEDNDNTVNRLSE
TKNSSDSGIAGKLKQLKIEKINSDSTNENYFSRNKSDFENRYSSNNFEDELNQDNDIEGY
SNNSFQQKRTFNRRPQFNRNRSENWDENWEDEDSFKSSRPFNRGSQFNKSRGGDFQRNFN
SSFQNRYEDRGFQKGRFSNDYGRDNFASRKREQRKPEYKEFQKDFYKENESVHNRSNEEV
KAFYEKHQITLSNTDLRPLETFEEAGFPDIINRKLQEEAFTSPTAIQSVTWPLALSGKDV
IGIAQTGSGKTLGFMLPAFVHIQNQEKLQRGDGPICLVLVPTRELCQQVQEVADRFGYPM
RMRSAAIYGGANRYPQLQKLSRGAEVCIATPGRLNDFLSSGETNLDRCTCLVLDEADRML
DMGFEPQIRQIIEQIRPDRQTLMWSATWPEEVQELANDYLTDHVKINVGSVDLIANKNIK
QEVVICNSHEKPQELGKILQQIIQSPKDEKVLIFAQTKVMCERISQEIRRNGIHNVCIHG
DKSQRQRDHCLEVFRNGRVKIMVATDVCARGLDVSDITYVVNYDFPPKGVEDYIHRIGRT
GRAGNSGTAVTLFSYDDRNSARDLIKIMKEADQEVPEELLGMTRHSHGNQRRNSRYQPSY
RRDSRDYQDRRPFRHRMNRGEGYASGFTRMDD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcacgtgggggtgtttgtaaactcataggaacattatatcaaagcagtgcttca
tgtattgtcatcagatatccaagaaatgctggtagatatatattgaggaactgttccgtc
tcaaccaaatttgcagatgttgatgaggacaatgacaatacagttaatagactgagtgaa
accaaaaacagttcagatagtggtatagctggcaaattaaaacaacttaaaattgaaaaa
ataaattcagattcaacaaatgagaattatttttcaaggaataaaagtgactttgaaaac
agatatagtagtaataattttgaggatgaattaaatcaagacaatgatattgaaggttat
tcaaataacagttttcaacaaaaaagaacattcaatagaagacctcagtttaatagaaat
aggtctgaaaattgggacgaaaattgggaagatgaggatagttttaaaagtagtagacca
ttcaatagaggatctcagttcaataaatctagaggtggagactttcaaaggaattttaat
agtagctttcaaaatagatatgaagacagaggtttccaaaagggaagatttagcaatgat
tatggaagagacaattttgcatctagaaaaagggaacaaagaaaaccagaatataaagaa
tttcaaaaagatttctacaaagaaaatgaaagtgttcataatagatctaatgaagaagtt
aaagcattttatgaaaagcatcagataacattatctaatacagatttacgtccattggaa
acatttgaagaagcaggatttccagacatcatcaacagaaaattacaggaagaagctttt
acatcaccaacagcaatacagtctgtaacctggcccctggcattgtctgggaaagatgtt
ataggcatagctcaaacaggatcagggaaaacattaggatttatgttgccagcatttgtt
catatacagaaccaagaaaaattacagcgaggagatggaccaatatgtctagtgttagta
ccaacaagagagttatgtcaacaagtacaggaagtagctgatcggtttggatatccaatg
agaatgaggagtgcagcaatatatggtggtgctaataggtatccacagttacagaaactg
tcaagaggtgctgaagtgtgcatcgccacccctggaagattgaatgattttctaagttcc
ggtgaaacaaatctagatagatgtacctgccttgttttagacgaggcagacagaatgtta
gatatgggatttgaaccacagattagacaaattatagaacaaattaggcctgacagacaa
acactaatgtggagtgctacctggcctgaagaagtacaagagttagccaatgattacctg
acagatcatgtcaagataaatgttggatcagttgatttaattgcaaacaaaaatataaaa
caagaagtcgttatttgtaattcacatgaaaagcctcaagaattgggaaaaatattacaa
caaattatacaatcacctaaagatgaaaaagtgttgatatttgcacagacaaaagttatg
tgtgagagaataagccaagaaataagaagaaatggcattcacaatgtttgtatccatggt
gataaaagtcaaagacaaagagaccactgcttagaagtatttcgtaatggccgagtaaaa
atcatggttgccacagatgtttgtgccagaggattagatgtaagtgacattacatatgtt
gtgaattatgacttcccaccaaaaggggtagaggattatatccatagaataggtagaact
ggcagagcaggcaattcaggaacagcagtcacattgttttcttatgacgacaggaattct
gctagagatttaataaagatcatgaaagaggcagaccaagaggtccctgaagaattgttg
ggaatgacaagacattcccatggcaaccaaagaagaaatagcagataccaaccaagttac
agaagagattccagagattaccaggatagaagacctttcagacacagaatgaatagagga
gaaggatatgcttcaggctttactcgcatggatgactga
DBGET
integrated database retrieval system
