Mytilus californianus (California mussel): 127708887
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Entry
127708887 CDS
T08804
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaf03021
]
127708887
Transcription machinery [BR:
mcaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127708887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EF3_N
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
127708887
NCBI-ProteinID:
XP_052070007
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MTTRLDRLFLLLDTGSTPLIRKSAAEQLGEVQKLHPYELNNLLSKVHGYLCSQSWETRIA
AGQAVEAICRNVPKFEPKICIKQESLEPATSEVTGKLLFSQFDLRKVLVHGTSLLSTEEK
QFELGEEFSGLDDKEKLSRQRQMLNKKLGLDMAGSLKLGLDGDLFSDEDLKSGLSTSCDN
TIKQEKTCVSEIIKQQLMDVTSGMSARERNRAKRRTKLLAKQRSRDVQSEQLSFDAEPPL
KKSRSLAEGDTNSNGKLNVEIKEEKLIIENNADNTLNMEEVEEWPFESFSEMLMNDLFHS
SWETRHGAATGLRDVIKYHGNTAGMSVDTPQDQLTGINQFWLSDVSLRLLCVMALDRFGD
FVSDEVVAPVRESCAQCLGVLIKFLNAPEVEGVVMVLLQLLSQSQWEVRHGGLLGFKYLL
AVRQDMTEIILPTILPSLFCGIQDISDDVRAVAAAALVPVANSLITLMPLQVPLIVSCLW
ETLLDLDDLTSSTNSIMTLLSTMLSHPQSSILNWLTTPLTELVPRLWPFLRHNITSVRKS
ALETFYTLLTVETPQHPTSAWLPFILSDALRHIYQRSLLEENLDVLSVVIKVWSKLLMKV
PLEHLLSQATPWLGVWLSQCMQPSNIPFDPVYMLSAKHRVRPEGARNQMCQIPQPSPRTD
INKDYIAGMLTLNASVLERDTAVLKARMTSAKLLGMLCDFITRDVPDFPSGPEKPVDSIA
KLFIFHLNNKSAVQRFVIGQVTYEWANASQNCTCPESVTTKLMECLCESLYYDEIAVSFT
HMQSDCKDFISALKQQGVDLDVYYPPGNILTVEQASALTTSVYEEIRSNLRPKVHQTFED
RRKQLQKMVEQTTKELQTLTLRVQCSLSKAVVELNNLPEKMNPVVRPLMECMKKEENIDL
QFEAAESLCHLIKKCLTRNPNPSVKVVKNLHGFLCCDPTFTPLVENPQADITDGVEVKCT
KTSGILTLTKHQKATDVGRRWLRKTPSVKLDLGVSPELAEDKAEIQKQHQIQRRGGDVAL
SKMCRLFGDHLGTELPTLWEAITSPLEKLEKDITEEIPTDIAQETVNSLQLIEAVGSSLD
SSLIEQIKQKLSSILNGLKNSYTAIRHMSARSVGMMAQILTSHTLSFIMDKILPLMGDME
HEKHRQGACEALACVIDVMGMDLLPYIVLLVVPILGRMSDQNEAVRLMATHCFATLIRLM
PLEAGVPDPPEMEARLTAEKEKQRQFLEQLMDSSKLESYKVAIPVDAELRKYQQDGVNWL
AFLNKYSLHGILCDDMGLGKTLQSICILASDHFLRDQKYQNTKGPDCVPMPSIVVCPPTL
IGHWVYEVNKFVDVKYLNPLMYAGPPGERTRLQKKVKKHNLIVASYDVVRNDIDFFGSIK
WNYCVLDEGHVIKNGKTKLSKAVKQLTCNHRLILSGTPIQNNVLDLWSLFDFLMPGFLGT
EKQFQARYGKPILQSRDAKSTSKEQEAGALAMESLHRQVLPFILRRLKEDVLQDLPPKII
QDYYCDLSPLQVQLYEDFAKSRAKQGLDDVVTQLGGEEDTQKQSPSIGHVFQALQYLKKV
CNHPSLVLTPNHPKYKEITLQLKQQNSNLRDLQHTPKLMALRQLLNDCGIGVSSFSGTSG
QAALSEGPVVGQHRVLLFCQLKSMLEIVENDLLKTHMPSVTYLRLDGSVPANNRHNIVNR
FNNDPSIDILLLTTHVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVY
RLITRGTLEEKIMGLQKFKMTIANTVISQENASLQSMGTDQLLDLFSLDEKNKGEKIAGS
SQGDKWNRKESMQTVIESLGELWDESQYEKEYSLDNFMESLK
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccagattagatcggttgttcctactcttggatactggatcaacacctttgata
agaaaatcagctgctgaacagcttggtgaggtccagaaattacacccttatgaactgaac
aatcttttatcaaaggttcatggatacttatgtagccaaagttgggaaaccagaattgcc
gcagggcaggcagttgaagcaatatgtaggaatgtgccaaaatttgaacccaaaatatgt
attaagcaagagtccttagaacctgccacttcagaagttacagggaagttgctgttttct
cagtttgatctcaggaaagttcttgttcatggaacttcattacttagcaccgaagaaaaa
cagtttgaacttggagaagaattttctggattagatgataaagagaaactaagtagacaa
cgacagatgttaaacaagaaactaggtttagatatggcgggaagcttgaaattaggtctt
gatggggatttattttcggacgaggatcttaaatctggattaagcacatcttgtgacaat
acaattaaacaagaaaagacatgtgtatcagagataataaaacaacaactaatggatgtt
accagtggaatgagtgccagagaaagaaacagagccaagcgtagaactaaattgttagct
aaacagaggtcaagggatgtccaaagtgagcagctttcattcgatgcagaacctccattg
aaaaagtcaaggtcattggctgaaggtgacactaacagtaatgggaaattaaatgttgag
attaaagaagagaaactcatcatagaaaacaatgctgataatactctaaatatggaagag
gtagaagaatggccatttgaatccttcagtgagatgttgatgaacgacctcttccatagt
tcatgggaaaccaggcatggtgctgcaactggtctgagggatgttataaaataccatggc
aacacagcaggaatgtcagtggatacacctcaggatcaacttacaggaataaaccagttc
tggctttcagatgtatccctcagactgttatgtgtaatggctctggatagatttggagat
tttgtgtcagatgaggtggtagctccagtgcgagaatcatgtgctcaatgtttaggtgtt
ctaatcaagtttttaaatgctccagaggtagaaggtgttgtcatggtattactgcagctg
ttaagtcagagtcagtgggaagtccgacatggtggccttcttggatttaagtatcttttg
gcagttagacaggatatgacagagataatattgccaaccattctgccttccttgttctgt
ggcatccaggatataagtgatgacgtcagagctgtggcagctgcagctttagtaccagtg
gcaaacagtctcattacccttatgccattacaggtgccactaatagtatcatgtttgtgg
gagacattacttgacctggatgacctcacatcatcaaccaatagcatcatgacattgcta
tcaacaatgttatctcatcctcaatcatctatactaaactggttaacaaccccgcttaca
gaattggtgccaagattatggccatttctaagacacaacataacttctgtcagaaagtca
gccctagaaacattttatacgttattaactgtcgaaacaccacaacatccaacatcagca
tggctgccatttatcttaagtgatgcccttcgtcacatttatcagaggagcctcctggaa
gagaatttagacgtattatctgttgtaataaaagtatggtccaagttacttatgaaagtg
cccctggaacatctgttatcgcaggcaacaccctggttaggagtctggttgtcacagtgt
atgcagccttccaacatcccgtttgatccggtttacatgctgtctgctaaacatcgtgtt
cggcctgaaggagcccgtaaccagatgtgtcagattcctcaaccgtcccctagaacagac
atcaataaagattacatagctggaatgttaacactgaatgcatcagtcctagaaagagat
acagctgtactgaaagccagaatgacatcagcaaaattactgggtatgctttgcgatttt
ataaccagagatgtaccagatttcccttcaggaccagagaaacctgtggactctattgcc
aaactgtttatatttcatctgaataacaagtcagcagtccaaagatttgtcataggccag
gttacatatgaatgggccaatgccagtcagaattgtacctgtcctgaaagtgtgactacc
aaattaatggaatgtttatgtgaatctctgtattatgatgagatagcagtttccttcaca
cacatgcagtctgactgtaaagattttatatcagctcttaaacaacaaggtgtagattta
gatgtgtattatccacctggtaatatattaacagtagaacaagcctctgctctaaccacc
tcagtttatgaagagattaggtccaatctccgtccaaaggttcatcagacttttgaagat
agaagaaaacagttacagaaaatggtcgagcagacaactaaagaactacaaactcttacc
ctcagagtgcagtgttcattatccaaagcagttgtagaattgaacaatttaccagaaaaa
atgaatccagttgttaggccactgatggaatgtatgaagaaagaagaaaatattgatctc
cagtttgaggcagctgaaagtttgtgtcacctgattaagaaatgtcttacacgaaatccc
aatcccagtgtcaaggtagtcaagaatctacatggatttctgtgctgtgatccaactttc
actcctctggtagaaaatcctcaggctgatatcacagatggagttgaagtgaaatgtaca
aagacctcaggaattttaactttaacaaaacaccaaaaggcaaccgatgttgggaggaga
tggctcaggaaaactccaagtgtcaagttagatcttggtgtttcacctgaattagcagaa
gacaaagcagagatacaaaaacagcatcagatacaaagaagaggaggtgatgtggctctc
agtaaaatgtgtcgactctttggagatcatttgggaactgagttacctaccttgtgggaa
gctattactagtcctttagaaaagttagaaaaagatattacagaagaaattccaacagat
attgctcaggagactgttaattcattacagttaatagaagctgtcggatcctcattagac
tcatcactcatagaacagataaaacagaaactttcctccattttgaatggattaaagaat
tcatacacagcaattagacacatgtcagcacgaagtgtgggcatgatggcccagatatta
acctcacacaccttatcatttattatggataaaatcctgccattaatgggagacatggaa
catgaaaaacatagacaaggagcttgtgaagctttagcctgtgtaatagacgtgatggga
atggatctcttgccatacatagtattactggtagtacccattttagggagaatgagtgat
cagaatgaggctgtcagactcatggccacacactgttttgccacactgattcgactaatg
ccactcgaggccggggttccagacccacctgaaatggaggctaggctgacagcagagaaa
gaaaagcaacgtcagtttttggaacagttgatggatagctcaaaattggagagttacaaa
gtggctataccagtagatgcagagctcagaaaatatcaacaggatggtgtaaattggtta
gcatttctaaacaagtacagtttacatggaatactgtgtgatgacatgggattagggaag
actttgcagtctatctgtatcttagctagtgaccattttctgagagatcaaaagtaccag
aatacaaaaggtcctgattgtgtaccaatgccatctattgttgtgtgtccacccacactg
attggtcactgggtatatgaagttaacaagtttgtggatgtgaaatatctgaatcctctg
atgtatgctggacccccaggggagagaactagattacagaagaaagtaaagaagcacaac
ttgatagtggcatcatatgatgttgtaaggaatgacattgatttctttgggtcaataaaa
tggaattattgtgtactggatgagggacatgttattaaaaatggtaaaacaaagttatca
aaagctgtaaaacagctgacctgtaaccacagactgatattgtcagggacccctatccag
aacaatgtcttggacttgtggtccctgtttgatttcctgatgcctggattcctgggtact
gagaaacaattccaggccagatatggcaaacccattctacaaagtagggatgccaagagc
acgtctaaggaacaagaagcaggagcattagctatggaatctcttcacagacaagtctta
ccgttcatcctaagaagattaaaggaggatgtattacaggacttaccccctaaaatcata
caggattattactgtgatctcagtccattacaggttcagttgtatgaagattttgccaag
tcgagggcaaagcaaggtttggatgatgttgtcactcaattaggaggagaggaagataca
cagaaacagagtccatcaatcggtcacgtgttccaggcattacaatacctaaagaaagtc
tgtaatcacccatctctggtactgacgccaaaccatcctaaatataaagagattactctc
cagctcaaacaacagaattccaatctgcgtgatctccaacatactcctaaactaatggct
ctcagacaattgttaaatgattgtggtataggggtgtccagtttcagtggtaccagtggt
caggcagctttgagtgaaggtccagttgttggtcagcacagggtcttgctcttctgtcag
ctcaaaagtatgctggaaatcgtagaaaatgatctgctcaaaactcacatgccaagtgtt
acttacctcaggttagatggaagtgtacctgccaataacagacataatattgttaacagg
ttcaacaatgatccatctattgatattttattattgactactcacgttggaggacttgga
ttaaatttgactggtgctgatactgtcatctttgtggaacacgattggaatccaatgaaa
gatttacaggccatggacagagcacacagaattggacagaagaaagttgtcaatgtatat
aggctgattacaagaggaacacttgaggaaaagatcatgggtcttcaaaagttcaaaatg
acaattgctaacacagttatcagccaagaaaatgccagcttacaaagcatgggaactgat
cagttgttagacctgttttcattggatgagaagaacaaaggagaaaagattgcaggctca
tcacagggagacaaatggaatagaaaggaaagcatgcaaactgttatcgaaagtctaggg
gaattatgggatgaatcacaatatgaaaaggaatacagtctggacaattttatggaatct
cttaaatga
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integrated database retrieval system
